RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 FLRT3Q9NZU0 649 aa12.72□□□□□ -0.37
LYSMD3-202ENST00000453259 DMGDHQ9UI17 866 aaKnown RBP12.72□□□□□ -0.37
LYSMD3-202ENST00000453259 ZNF180Q9UJW8 692 aa12.72□□□□□ -0.37
LYSMD3-202ENST00000453259 GOLGA8QA0A0J9YX86 632 aa12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 A0A1W2PQD3 144 aa12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 A0A1W2PRB8 838 aa12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 GOLGA8OA6NCC3 632 aa12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 GOLGA8NF8WBI6 632 aa12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 H3BQF6 201 aa12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 GOLGA8RI6L899 631 aa12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 KIF2AO00139 706 aaPredicted RBP12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 TNFSF11O14788 317 aa12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 ADAM11O75078 769 aa12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 SUPT7LO94864 414 aa12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 SLC25A16P16260 332 aa12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 NAA20P61599 178 aa12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 VLDLRP98155 873 aa12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 BSPH1Q075Z2 132 aa12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 LOXL1Q08397 574 aaPredicted RBP12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 LCP2Q13094 533 aa12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 GRAMD1BQ3KR37 738 aa12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 GLE1Q53GS7 698 aaKnown RBP12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 AGAP6Q5VW22 663 aa12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 APOOLQ6UXV4 268 aa12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 Q6ZT83 130 aa12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 TMEM151AQ8N4L1 468 aa12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 BANPQ8N9N5 519 aa12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 CDRT4Q8N9R6 151 aa12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 OR6Y1Q8NGX8 325 aa12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 CEP70Q8NHQ1 597 aa12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 OSTF1Q92882 214 aa12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 APIPQ96GX9 242 aa12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 RNF145Q96MT1 663 aa12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 C12orf49Q9H741 205 aa12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 MED17Q9NVC6 651 aa12.71□□□□□ -0.37
LYSMD3-202ENST00000453259 A0A0J9YW62 118 aa12.7□□□□□ -0.38
LYSMD3-202ENST00000453259 ELOA3DA6NLF2 546 aaPredicted RBP12.7□□□□□ -0.38
LYSMD3-202ENST00000453259 NKX2-2O95096 273 aa12.7□□□□□ -0.38
LYSMD3-202ENST00000453259 OXSR1O95747 527 aaPredicted RBP12.7□□□□□ -0.38
LYSMD3-202ENST00000453259 HPGDP15428 266 aa12.7□□□□□ -0.38
LYSMD3-202ENST00000453259 GABRA3P34903 492 aa12.7□□□□□ -0.38
LYSMD3-202ENST00000453259 MAP3K8P41279 467 aa12.7□□□□□ -0.38
LYSMD3-202ENST00000453259 SLC18A2Q05940 514 aa12.7□□□□□ -0.38
LYSMD3-202ENST00000453259 C2orf80Q0P641 193 aa12.7□□□□□ -0.38
LYSMD3-202ENST00000453259 TMEM249Q2WGJ8 235 aa12.7□□□□□ -0.38
LYSMD3-202ENST00000453259 ELOA3BQ3SY89 546 aa12.7□□□□□ -0.38
LYSMD3-202ENST00000453259 ZNF678Q5SXM1 525 aa12.7□□□□□ -0.38
LYSMD3-202ENST00000453259 FAM71E1Q6IPT2 247 aa12.7□□□□□ -0.38
LYSMD3-202ENST00000453259 MFSD12Q6NUT3 480 aa12.7□□□□□ -0.38
LYSMD3-202ENST00000453259 CLEC2AQ6UVW9 174 aa12.7□□□□□ -0.38
LYSMD3-202ENST00000453259 SEZ6L2Q6UXD5 910 aa12.7□□□□□ -0.38
LYSMD3-202ENST00000453259 RPS27LQ71UM5 84 aaKnown RBP12.7□□□□□ -0.38
LYSMD3-202ENST00000453259 SLC22A9Q8IVM8 553 aa12.7□□□□□ -0.38
LYSMD3-202ENST00000453259 LILRA2Q8N149 483 aa12.7□□□□□ -0.38
LYSMD3-202ENST00000453259 ELOA3Q8NG57 546 aa12.7□□□□□ -0.38
LYSMD3-202ENST00000453259 OR10H5Q8NGA6 315 aa12.7□□□□□ -0.38
LYSMD3-202ENST00000453259 MUCL1Q96DR8 90 aa12.7□□□□□ -0.38
LYSMD3-202ENST00000453259 TNFRSF13CQ96RJ3 184 aa12.7□□□□□ -0.38
LYSMD3-202ENST00000453259 BEX2Q9BXY8 128 aa12.7□□□□□ -0.38
LYSMD3-202ENST00000453259 GLIPR2Q9H4G4 154 aa12.7□□□□□ -0.38
LYSMD3-202ENST00000453259 UBQLN4Q9NRR5 601 aa12.7□□□□□ -0.38
LYSMD3-202ENST00000453259 CISD1Q9NZ45 108 aaKnown RBP12.7□□□□□ -0.38
LYSMD3-202ENST00000453259 A0A096LNT2 108 aa12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 SHISA8B8ZZ34 492 aa12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 PRKD3O94806 890 aa12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 YES1P07947 543 aa12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 CSF3P09919 207 aa12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 SBK3P0C264 359 aa12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 PRPS2P11908 318 aa12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 CHN1P15882 459 aa12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 TSPAN8P19075 237 aa12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 IMPDH1P20839 514 aa12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 RFX3P48380 749 aa12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 SERPINB4P48594 390 aa12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 NUDT6P53370 316 aa12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 MANFP55145 182 aaKnown RBP12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 SUMO3P55854 103 aaPredicted RBP12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 FAPQ12884 760 aa12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 TIMM23BQ5SRD1 257 aa12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 ZCCHC12Q6PEW1 402 aa12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 BHLHA15Q7RTS1 189 aaPredicted RBP12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 MTERF4Q7Z6M4 381 aaKnown RBP12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 KBTBD8Q8NFY9 601 aa12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 ZFP28Q8NHY6 868 aa12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 GPR151Q8TDV0 419 aa12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 PAFAH2Q99487 392 aa12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 KCNF1Q9H3M0 494 aa12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 BCO1Q9HAY6 547 aa12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 ZDHHC18Q9NUE0 388 aa12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 NTMQ9P121 344 aa12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 KLHL9Q9P2J3 617 aa12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 MGAT4BQ9UQ53 548 aa12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 ACTL7BQ9Y614 415 aa12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 CUBNO60494 3623 aa12.69□□□□□ -0.38
LYSMD3-202ENST00000453259 SCDO00767 359 aa12.68□□□□□ -0.38
LYSMD3-202ENST00000453259 IGKV1D-16P01601 117 aa12.68□□□□□ -0.38
LYSMD3-202ENST00000453259 CD8AP01732 235 aa12.68□□□□□ -0.38
LYSMD3-202ENST00000453259 LINGO3P0C6S8 592 aa12.68□□□□□ -0.38
LYSMD3-202ENST00000453259 BMP4P12644 408 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms