RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 CENPSQ8N2Z9 138 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 ARFGAP1Q8N6T3 406 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 CSNK1A1LQ8N752 337 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 ARL14EPQ8N8R7 260 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 C8orf31Q8N9H6 132 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 POC1AQ8NBT0 407 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 NPEPL1Q8NDH3 523 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 NUDCD2Q8WVJ2 157 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 FCAMRQ8WWV6 532 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 SMARCD2Q92925 531 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 UPRTQ96BW1 309 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 TIMD4Q96H15 378 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 RNF170Q96K19 258 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 DNAJC1Q96KC8 554 aaKnown RBP3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 AGAP4Q96P64 663 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 GATA5Q9BWX5 397 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 ULBP2Q9BZM5 246 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 SCAND2PQ9GZW5 306 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 GBA3Q9H227 469 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 TUBB1Q9H4B7 451 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 ZNF665Q9H7R5 613 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 FOLH1BQ9HBA9 442 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 ANKHQ9HCJ1 492 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 VCX3AQ9NNX9 186 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 SLC17A5Q9NRA2 495 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 ZNF701Q9NV72 531 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 SYBUQ9NX95 663 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 USE1Q9NZ43 259 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 STMN3Q9NZ72 180 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 CD274Q9NZQ7 290 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 IKZF3Q9UKT9 509 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 ST3GAL5Q9UNP4 418 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 MAP3K2Q9Y2U5 619 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 YIPF1Q9Y548 306 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 RPAP1Q9BWH6 1393 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 CDHR2Q9BYE9 1310 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 LOC105371267A0A1B0GV96 52 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 MED19A0JLT2 244 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 SH3PXD2BA1X283 911 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 PRSS37A4D1T9 235 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 SHISA7A6NL88 538 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 H0YJX3 145 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 H3BN98 237 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 MKRN2OSH3BPM6 223 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 TULP2O00295 520 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 OR7A17O14581 309 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 ARPC2O15144 300 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 INSIG1O15503 277 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 CFLARO15519 480 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 EMC8O43402 210 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 GPR137BO60478 399 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 GMDSO60547 372 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 STK17BO94768 372 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 VAPBO95292 243 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 FARS2O95363 451 aaKnown RBP3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 DEXIO95424 95 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 IFNA14P01570 189 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 PET100P0DJ07 73 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 PSKH1P11801 424 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 NR2C1P13056 603 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 PRF1P14222 555 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 NDUFB7P17568 137 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 PGAM1P18669 254 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 TBXA2RP21731 343 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 BCKDHBP21953 392 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 DCKP27707 260 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 RBMS1P29558 406 aaKnown RBP3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 DUTP33316 252 aaKnown RBP3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 ACVR1BP36896 505 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 GDF5P43026 501 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 COMPP49747 757 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 GNG10P50151 68 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 HMGCS2P54868 508 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 CLDN17P56750 224 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 CLDN20P56880 219 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 ACTBP60709 375 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 MAGOHP61326 146 aaKnown RBP3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 ATP6V0D1P61421 351 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 ACTA2P62736 377 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 KCNJ2P63252 427 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 ACTG1P63261 375 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 ACTG2P63267 376 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 ACTC1P68032 377 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 ACTA1P68133 377 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 S100A12P80511 92 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 DGCR2P98153 550 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 KLC1Q07866 573 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 CHI3L2Q15782 390 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 QRICH1Q2TAL8 776 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 ZNF699Q32M78 642 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 PAN3Q58A45 887 aaKnown RBP3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 SAMD4BQ5PRF9 694 aaKnown RBP3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 CELF3Q5SZQ8 465 aaKnown RBP3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 C9orf135Q5VTT2 229 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 C22orf42Q6IC83 251 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 C17orf107Q6ZR85 190 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 ASRGL1Q7L266 308 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 ZNF367Q7RTV3 350 aa3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 WDR53Q7Z5U6 358 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P21-201ENST00000452483 BCDIN3DQ7Z5W3 292 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms