RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 TPD52L3Q96J77 140 aa3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 APOLD1Q96LR9 279 aa3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 LINC00052Q96N35 136 aa3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 C7orf50Q9BRJ6 194 aaKnown RBP3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 PELOQ9BRX2 385 aaKnown RBP3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 TMEM175Q9BSA9 504 aa3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 DUSP26Q9BV47 211 aa3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 SARGQ9BW04 601 aa3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 TSSK6Q9BXA6 273 aa3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 CIPCQ9C0C6 399 aa3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 ABCG4Q9H172 646 aa3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 MED28Q9H204 178 aa3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 OR51B5Q9H339 312 aa3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 SARS2Q9NP81 518 aaKnown RBP3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 WASH6PQ9NQA3 447 aa3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 IFT46Q9NQC8 304 aa3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 ASB6Q9NWX5 421 aa3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 WWOXQ9NZC7 414 aa3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 ZNF224Q9NZL3 707 aa3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 FLRT1Q9NZU1 646 aa3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 CACNG4Q9UBN1 327 aa3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 ZNF282Q9UDV7 671 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 SCP2D1Q9UJQ7 156 aa3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 OGDHLQ9ULD0 1010 aa3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 MGAT4BQ9UQ53 548 aa3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 LIPT1Q9Y234 373 aa3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 PIN4Q9Y237 131 aaKnown RBP3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 YARS2Q9Y2Z4 477 aaKnown RBP3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 ZNF175Q9Y473 711 aa3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 NUBP2Q9Y5Y2 271 aa3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 PRSS21Q9Y6M0 314 aa3.86□□□□□ -1.79
HMGB3P22-202ENST00000451823 IGLV3-16A0A075B6K0 115 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 A0A0G2JK05 382 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 TRBV4-1A0A0J9YWV2 114 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 A0A1W2PRG6 482 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 A0A1W2PRQ8 180 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 PLSCR5A0PG75 271 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 IRGMA1A4Y4 181 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 MTMR11A4FU01 709 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 ANKRD61A6NGH8 418 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 A8MX80 341 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 ISM1B1AKI9 464 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 KDM4EB2RXH2 506 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 H0YIV9 168 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 H3BUI4 141 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 J3QRE1 110 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 CXCL11O14625 94 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 INPPL1O15357 1258 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 SLC16A5O15375 505 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 ITGA10O75578 1167 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 SERPINI2O75830 405 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 LRATO95237 230 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 SPDEFO95238 335 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 SLC25A14O95258 325 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 PRAMEF12O95522 483 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 CPSF4O95639 269 aaKnown RBP3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 GUCA1CO95843 209 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 TGM6O95932 706 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 MOCS2O96007 188 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 DHFRP00374 187 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 IFNA14P01570 189 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 TCRBP04435 133 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 HMGN1P05114 100 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 SRPRAP08240 638 aaKnown RBP3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 ANXA5P08758 320 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 IGFBP1P08833 259 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 NMBP08949 121 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 ZDHHC11BP0C7U3 371 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 LIMS3P0CW19 117 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 LIMS4P0CW20 117 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 MPC1LP0DKB6 136 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 SMIM10L2AP0DMW4 78 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 SMIM10L2BP0DMW5 78 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 ACP2P11117 423 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 EGR2P11161 476 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 PEPDP12955 493 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 ETFAP13804 333 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 COX7A2P14406 83 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 ZNF7P17097 686 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 ZNF8P17098 575 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 ELK1P19419 428 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 CXCL3P19876 107 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 CD22P20273 847 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 TNFRSF1BP20333 461 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 RAB3AP20336 220 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 NPR2P20594 1047 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 DDX6P26196 483 aaKnown RBP eCLIP3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 ELAVL4P26378 380 aaKnown RBP3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 MMP12P39900 470 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 ADCYAP1R1P41586 468 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 ASMTP46597 345 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 LSSP48449 732 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 MTNR1BP49286 362 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 HOXA1P49639 335 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 ELLP55199 621 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 LIM2P55344 173 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 ARPP19P56211 112 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 CTBP2P56545 445 aa3.85□□□□□ -1.79
HMGB3P22-202ENST00000451823 CDK6Q00534 326 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms