RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 TBXA2RP21731 343 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 ELF3P78545 371 aaPredicted RBP11.91□□□□□ -0.5
VPS33A-202ENST00000451053 MS4A2Q01362 244 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 FOXO1Q12778 655 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 SNTA1Q13424 505 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 ELOAQ14241 798 aaKnown RBP11.91□□□□□ -0.5
VPS33A-202ENST00000451053 KPNB1Q14974 876 aaKnown RBP11.91□□□□□ -0.5
VPS33A-202ENST00000451053 RNFT1Q5M7Z0 435 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 TBCELQ5QJ74 424 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 FNDC7Q5VTL7 733 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 SLC30A6Q6NXT4 461 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 LRRC74BQ6ZQY2 392 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 CCDC80Q76M96 950 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 SPATA24Q86W54 205 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 KRT73Q86Y46 540 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 EID3Q8N140 333 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 ZNF619Q8N2I2 560 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 GATSQ8NAP1 163 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 FAM98AQ8NCA5 519 aaKnown RBP11.91□□□□□ -0.5
VPS33A-202ENST00000451053 NFKBIDQ8NI38 313 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 BBS10Q8TAM1 723 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 WDR60Q8WVS4 1066 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 PMM1Q92871 262 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 ZG16BQ96DA0 208 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 RSRC1Q96IZ7 334 aaKnown RBP11.91□□□□□ -0.5
VPS33A-202ENST00000451053 FRMD6Q96NE9 622 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 SPATA5L1Q9BVQ7 753 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 TBL1XR1Q9BZK7 514 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 QRSL1Q9H0R6 528 aaKnown RBP11.91□□□□□ -0.5
VPS33A-202ENST00000451053 CACYBPQ9HB71 228 aaKnown RBP11.91□□□□□ -0.5
VPS33A-202ENST00000451053 UBQLN4Q9NRR5 601 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 GMPR2Q9P2T1 348 aaKnown RBP11.91□□□□□ -0.5
VPS33A-202ENST00000451053 ANAPC2Q9UJX6 822 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 RPS6KA6Q9UK32 745 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 USP22Q9UPT9 525 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 NTNG1Q9Y2I2 539 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 WIF1Q9Y5W5 379 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 ATMQ13315 3056 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 CNTRLQ7Z7A1 2325 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 DSPPQ9NZW4 1301 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 A0A0G2JPF8 293 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 HNRNPCL2B2RXH8 293 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 B4DXG7 233 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 HNRNPCL3B7ZW38 293 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 ALG1L2C9J202 215 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 SCDO00767 359 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 GNB5O14775 395 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 SERPINB7O75635 380 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 UGT2B17O75795 530 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 C1QL1O75973 258 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 SNX4O95219 450 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 GUSBP08236 651 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 HNRNPCL4P0DMR1 293 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 UMPSP11172 480 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 NCK1P16333 377 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 ATP6V1B2P21281 511 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 KDELR2P33947 212 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 ATP12AP54707 1039 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 CD226Q15762 336 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 ZNF141Q15928 474 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 INAQ16352 499 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 MAPK14Q16539 360 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 KLHL26Q53HC5 615 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 PDZK1Q5T2W1 519 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 AP1ARQ63HQ0 302 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 ZFP1Q6P2D0 407 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 CYP2R1Q6VVX0 501 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 PACS2Q86VP3 889 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 CISD2Q8N5K1 135 aaKnown RBP11.9□□□□□ -0.5
VPS33A-202ENST00000451053 ZNF614Q8N883 585 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 ZFP62Q8NB50 900 aaPredicted RBP11.9□□□□□ -0.5
VPS33A-202ENST00000451053 RASSF5Q8WWW0 418 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 TMEM41AQ96HV5 264 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 ZNF597Q96LX8 424 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 JSRP1Q96MG2 331 aaPredicted RBP11.9□□□□□ -0.5
VPS33A-202ENST00000451053 ZNF607Q96SK3 696 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 TREX2Q9BQ50 279 aaPredicted RBP11.9□□□□□ -0.5
VPS33A-202ENST00000451053 TTTY12Q9BZ98 90 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 HOXD1Q9GZZ0 328 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 BCL2L10Q9HD36 194 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 ADPRHL2Q9NX46 363 aa11.9□□□□□ -0.5
VPS33A-202ENST00000451053 SAMD4AQ9UPU9 718 aaKnown RBP11.9□□□□□ -0.5
VPS33A-202ENST00000451053 A0A1W2PQD3 144 aa11.89□□□□□ -0.51
VPS33A-202ENST00000451053 TTLL8A6PVC2 850 aa11.89□□□□□ -0.51
VPS33A-202ENST00000451053 FAM166BA8MTA8 275 aa11.89□□□□□ -0.51
VPS33A-202ENST00000451053 SNPHO15079 494 aa11.89□□□□□ -0.51
VPS33A-202ENST00000451053 FKBP6O75344 327 aa11.89□□□□□ -0.51
VPS33A-202ENST00000451053 GLSO94925 669 aaPredicted RBP11.89□□□□□ -0.51
VPS33A-202ENST00000451053 ANGPTL1O95841 491 aa11.89□□□□□ -0.51
VPS33A-202ENST00000451053 GPIP06744 558 aa11.89□□□□□ -0.51
VPS33A-202ENST00000451053 C8BP07358 591 aa11.89□□□□□ -0.51
VPS33A-202ENST00000451053 RFPL3SP0C7P2 107 aa11.89□□□□□ -0.51
VPS33A-202ENST00000451053 ETS2P15036 469 aa11.89□□□□□ -0.51
VPS33A-202ENST00000451053 HPGDP15428 266 aa11.89□□□□□ -0.51
VPS33A-202ENST00000451053 PSMA4P25789 261 aaKnown RBP11.89□□□□□ -0.51
VPS33A-202ENST00000451053 MASP1P48740 699 aa11.89□□□□□ -0.51
VPS33A-202ENST00000451053 CLK3P49761 638 aaKnown RBP11.89□□□□□ -0.51
VPS33A-202ENST00000451053 PCBP3P57721 371 aaKnown RBP11.89□□□□□ -0.51
VPS33A-202ENST00000451053 PLGLB1Q02325 96 aa11.89□□□□□ -0.51
VPS33A-202ENST00000451053 CCNIQ14094 377 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms