RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 MSTNO14793 375 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 TNFSF13O75888 250 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 ART1P52961 327 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 CLDN15P56746 228 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 SIRPAP78324 504 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 STX3Q13277 289 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 PON3Q15166 354 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 TESK1Q15569 626 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 CDC20BQ86Y33 519 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 WDR75Q8IWA0 830 aaKnown RBP13.76□□□□□ -0.21
CHD3-205ENST00000449744 RIMKLAQ8IXN7 391 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 ZNF527Q8NB42 609 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 OR5AK3PQ8NH89 298 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 B4GALNT2Q8NHY0 566 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 FNDC9Q8TBE3 224 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 PHOSPHO1Q8TCT1 267 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 ACTRT2Q8TDY3 377 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 ZBTB8AQ96BR9 441 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 ZBTB9Q96C00 473 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 ZNF845Q96IR2 970 aaPredicted RBP13.76□□□□□ -0.21
CHD3-205ENST00000449744 PRRG4Q9BZD6 226 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 HOXD1Q9GZZ0 328 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 AKTIPQ9H8T0 292 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 ASIC5Q9NY37 505 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 PCDHGB4Q9UN71 923 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 FAM221AA4D161 298 aa13.75□□□□□ -0.21
CHD3-205ENST00000449744 CASKO14936 926 aa13.75□□□□□ -0.21
CHD3-205ENST00000449744 DHRS4L1P0CG22 281 aa13.75□□□□□ -0.21
CHD3-205ENST00000449744 FCGR2AP12318 317 aa13.75□□□□□ -0.21
CHD3-205ENST00000449744 CD1EP15812 388 aa13.75□□□□□ -0.21
CHD3-205ENST00000449744 BGNP21810 368 aa13.75□□□□□ -0.21
CHD3-205ENST00000449744 EIF1AXP47813 144 aaKnown RBP13.75□□□□□ -0.21
CHD3-205ENST00000449744 C21orf58P58505 322 aa13.75□□□□□ -0.21
CHD3-205ENST00000449744 HBA1P69905 142 aa13.75□□□□□ -0.21
CHD3-205ENST00000449744 OCRLQ01968 901 aa13.75□□□□□ -0.21
CHD3-205ENST00000449744 FGFBP1Q14512 234 aa13.75□□□□□ -0.21
CHD3-205ENST00000449744 TMEM44Q2T9K0 475 aa13.75□□□□□ -0.21
CHD3-205ENST00000449744 DCST2Q5T1A1 773 aa13.75□□□□□ -0.21
CHD3-205ENST00000449744 HHATQ5VTY9 493 aa13.75□□□□□ -0.21
CHD3-205ENST00000449744 CAMKMTQ7Z624 323 aa13.75□□□□□ -0.21
CHD3-205ENST00000449744 MTERF4Q7Z6M4 381 aaKnown RBP13.75□□□□□ -0.21
CHD3-205ENST00000449744 GTPBP8Q8N3Z3 284 aaPredicted RBP13.75□□□□□ -0.21
CHD3-205ENST00000449744 METTL25Q8N6Q8 603 aa13.75□□□□□ -0.21
CHD3-205ENST00000449744 NINJ1Q92982 152 aa13.75□□□□□ -0.21
CHD3-205ENST00000449744 STARD4Q96DR4 205 aa13.75□□□□□ -0.21
CHD3-205ENST00000449744 PGM2Q96G03 612 aa13.75□□□□□ -0.21
CHD3-205ENST00000449744 DACH2Q96NX9 599 aa13.75□□□□□ -0.21
CHD3-205ENST00000449744 DPY30Q9C005 99 aa13.75□□□□□ -0.21
CHD3-205ENST00000449744 MED17Q9NVC6 651 aa13.75□□□□□ -0.21
CHD3-205ENST00000449744 GPATCH2Q9NW75 528 aa13.75□□□□□ -0.21
CHD3-205ENST00000449744 NDRG3Q9UGV2 375 aa13.75□□□□□ -0.21
CHD3-205ENST00000449744 ANKHD1Q8IWZ3 2542 aaKnown RBP13.75□□□□□ -0.21
CHD3-205ENST00000449744 ADGRG4Q8IZF6 3080 aa13.75□□□□□ -0.21
CHD3-205ENST00000449744 MED12LQ86YW9 2145 aa13.75□□□□□ -0.21
CHD3-205ENST00000449744 SH3D21A4FU49 640 aa13.74□□□□□ -0.21
CHD3-205ENST00000449744 GTPBP1O00178 669 aaKnown RBP13.74□□□□□ -0.21
CHD3-205ENST00000449744 GOSR1O95249 250 aa13.74□□□□□ -0.21
CHD3-205ENST00000449744 NUDT14O95848 222 aa13.74□□□□□ -0.21
CHD3-205ENST00000449744 ME2P23368 584 aa13.74□□□□□ -0.21
CHD3-205ENST00000449744 IST1P53990 364 aa13.74□□□□□ -0.21
CHD3-205ENST00000449744 CD226Q15762 336 aa13.74□□□□□ -0.21
CHD3-205ENST00000449744 PDSS1Q5T2R2 415 aa13.74□□□□□ -0.21
CHD3-205ENST00000449744 OR4F3Q6IEY1 312 aa13.74□□□□□ -0.21
CHD3-205ENST00000449744 VWA1Q6PCB0 445 aa13.74□□□□□ -0.21
CHD3-205ENST00000449744 SPNS3Q6ZMD2 512 aa13.74□□□□□ -0.21
CHD3-205ENST00000449744 GGNQ86UU5 652 aa13.74□□□□□ -0.21
CHD3-205ENST00000449744 ZNF614Q8N883 585 aa13.74□□□□□ -0.21
CHD3-205ENST00000449744 ANKRD42Q8N9B4 389 aa13.74□□□□□ -0.21
CHD3-205ENST00000449744 VPS37AQ8NEZ2 397 aa13.74□□□□□ -0.21
CHD3-205ENST00000449744 RNF145Q96MT1 663 aa13.74□□□□□ -0.21
CHD3-205ENST00000449744 OR7D2Q96RA2 312 aa13.74□□□□□ -0.21
CHD3-205ENST00000449744 SORT1Q99523 831 aa13.74□□□□□ -0.21
CHD3-205ENST00000449744 C20orf27Q9GZN8 174 aa13.74□□□□□ -0.21
CHD3-205ENST00000449744 RNF122Q9H9V4 155 aa13.74□□□□□ -0.21
CHD3-205ENST00000449744 PAQR5Q9NXK6 330 aaPredicted RBP13.74□□□□□ -0.21
CHD3-205ENST00000449744 ST6GALNAC2Q9UJ37 374 aa13.74□□□□□ -0.21
CHD3-205ENST00000449744 KCNE3Q9Y6H6 103 aa13.74□□□□□ -0.21
CHD3-205ENST00000449744 DCHS2Q6V1P9 2916 aa13.74□□□□□ -0.21
CHD3-205ENST00000449744 PCNX3Q9H6A9 2034 aa13.74□□□□□ -0.21
CHD3-205ENST00000449744 NPIPA5A0A0B4J1W7 369 aa13.73□□□□□ -0.21
CHD3-205ENST00000449744 RNF103-CHMP3A0A140T963 221 aa13.73□□□□□ -0.21
CHD3-205ENST00000449744 C7orf72A4D263 438 aa13.73□□□□□ -0.21
CHD3-205ENST00000449744 DUXAA6NLW8 204 aa13.73□□□□□ -0.21
CHD3-205ENST00000449744 NPIPA7E9PJI5 369 aa13.73□□□□□ -0.21
CHD3-205ENST00000449744 RNASET2O00584 256 aaKnown RBP13.73□□□□□ -0.21
CHD3-205ENST00000449744 SYNGR4O95473 234 aa13.73□□□□□ -0.21
CHD3-205ENST00000449744 PLGP00747 810 aaPredicted RBP13.73□□□□□ -0.21
CHD3-205ENST00000449744 NPIPA8P0DM63 369 aa13.73□□□□□ -0.21
CHD3-205ENST00000449744 LBPP18428 481 aa13.73□□□□□ -0.21
CHD3-205ENST00000449744 MATN1P21941 496 aa13.73□□□□□ -0.21
CHD3-205ENST00000449744 DNASE1P24855 282 aa13.73□□□□□ -0.21
CHD3-205ENST00000449744 KIR2DL2P43627 348 aaPredicted RBP13.73□□□□□ -0.21
CHD3-205ENST00000449744 KCNJ5P48544 419 aa13.73□□□□□ -0.21
CHD3-205ENST00000449744 ATP12AP54707 1039 aa13.73□□□□□ -0.21
CHD3-205ENST00000449744 RAC1P63000 192 aa13.73□□□□□ -0.21
CHD3-205ENST00000449744 MPP2Q14168 576 aa13.73□□□□□ -0.21
CHD3-205ENST00000449744 PLPPR5Q32ZL2 321 aa13.73□□□□□ -0.21
CHD3-205ENST00000449744 TNFAIP8L3Q5GJ75 292 aa13.73□□□□□ -0.21
CHD3-205ENST00000449744 C6orf120Q7Z4R8 191 aa13.73□□□□□ -0.21
CHD3-205ENST00000449744 BTLAQ7Z6A9 289 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms