RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 ZNF41P51814 821 aaPredicted RBP12.74□□□□□ -0.37
GTF3C3-206ENST00000448539 CRISP3P54108 245 aa12.74□□□□□ -0.37
GTF3C3-206ENST00000448539 FUT5Q11128 374 aa12.74□□□□□ -0.37
GTF3C3-206ENST00000448539 FADDQ13158 208 aa12.74□□□□□ -0.37
GTF3C3-206ENST00000448539 CD226Q15762 336 aa12.74□□□□□ -0.37
GTF3C3-206ENST00000448539 ZNF141Q15928 474 aa12.74□□□□□ -0.37
GTF3C3-206ENST00000448539 SYPL1Q16563 259 aa12.74□□□□□ -0.37
GTF3C3-206ENST00000448539 GXYLT1Q4G148 440 aa12.74□□□□□ -0.37
GTF3C3-206ENST00000448539 PDZK1Q5T2W1 519 aa12.74□□□□□ -0.37
GTF3C3-206ENST00000448539 RAET1LQ5VY80 246 aa12.74□□□□□ -0.37
GTF3C3-206ENST00000448539 TYW3Q6IPR3 259 aaKnown RBP12.74□□□□□ -0.37
GTF3C3-206ENST00000448539 ZNF585AQ6P3V2 769 aa12.74□□□□□ -0.37
GTF3C3-206ENST00000448539 ENPP6Q6UWR7 440 aa12.74□□□□□ -0.37
GTF3C3-206ENST00000448539 LRRC74BQ6ZQY2 392 aa12.74□□□□□ -0.37
GTF3C3-206ENST00000448539 OLIG3Q7RTU3 272 aa12.74□□□□□ -0.37
GTF3C3-206ENST00000448539 DOLPP1Q86YN1 238 aa12.74□□□□□ -0.37
GTF3C3-206ENST00000448539 TMCO5AQ8N6Q1 288 aa12.74□□□□□ -0.37
GTF3C3-206ENST00000448539 OIT3Q8WWZ8 545 aa12.74□□□□□ -0.37
GTF3C3-206ENST00000448539 C1GALT1C1Q96EU7 318 aa12.74□□□□□ -0.37
GTF3C3-206ENST00000448539 TP63Q9H3D4 680 aaPredicted RBP12.74□□□□□ -0.37
GTF3C3-206ENST00000448539 PNPLA3Q9NST1 481 aa12.74□□□□□ -0.37
GTF3C3-206ENST00000448539 SLC25A37Q9NYZ2 338 aa12.74□□□□□ -0.37
GTF3C3-206ENST00000448539 VAPAQ9P0L0 249 aa12.74□□□□□ -0.37
GTF3C3-206ENST00000448539 SPRR3Q9UBC9 169 aa12.74□□□□□ -0.37
GTF3C3-206ENST00000448539 TNFRSF10DQ9UBN6 386 aa12.74□□□□□ -0.37
GTF3C3-206ENST00000448539 ERRFI1Q9UJM3 462 aaPredicted RBP12.74□□□□□ -0.37
GTF3C3-206ENST00000448539 ZGRF1Q86YA3 2104 aa12.74□□□□□ -0.37
GTF3C3-206ENST00000448539 PTPN13Q12923 2485 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 A0A087WZY1 265 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 LOC100653049A0A140TA62 436 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 SERINC4A6NH21 518 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 C5orf58C9J3I9 102 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 HAX1O00165 279 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 ADAM10O14672 748 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 TNFRSF21O75509 655 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 UGT2B17O75795 530 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 KRT34O76011 436 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 NUDT14O95848 222 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 BCHEP06276 602 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 UBL4AP11441 157 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 BMP7P18075 431 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 RNF144AP50876 292 aaPredicted RBP12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 MVDP53602 400 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 CHRNEQ04844 493 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 CYLC2Q14093 348 aaPredicted RBP12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 NHSL2Q5HYW2 709 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 GCNT6Q5T4J0 391 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 C3P1Q6ZMU1 363 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 FRRS1Q6ZNA5 592 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 EIF3MQ7L2H7 374 aaKnown RBP12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 SNX32Q86XE0 403 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 PM20D2Q8IYS1 436 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 DPP10Q8N608 796 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 SSC4DQ8WTU2 575 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 PMM1Q92871 262 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 PIGQQ9BRB3 760 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 SAP130Q9H0E3 1048 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 MTHFD2LQ9H903 347 aaPredicted RBP12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 ARMCX1Q9P291 453 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 CARD8Q9Y2G2 431 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 MEMO1Q9Y316 297 aa12.73□□□□□ -0.37
GTF3C3-206ENST00000448539 UTP20O75691 2785 aaKnown RBP12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 TRBV5-3A0A0A0MS03 114 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 PRAMEF27A3QJZ7 478 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 E9PLN8 166 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 MRASO14807 208 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 ZNF264O43296 627 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 ZIC3O60481 467 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 SNX3O60493 162 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 EIF4E2O60573 245 aaKnown RBP12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 WDR1O75083 606 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 CYP7B1O75881 506 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 CSTAP01040 98 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 CHRM4P08173 479 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 GABRA1P14867 456 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 HOXB9P17482 250 aaPredicted RBP12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 P2RX1P51575 399 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 CCR4P51679 360 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 SUMO3P55854 103 aaPredicted RBP12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 CRYZQ08257 329 aaKnown RBP12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 SF3B4Q15427 424 aaKnown RBP eCLIP12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 GLYR1Q49A26 553 aaPredicted RBP12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 RUNDC3AQ59EK9 446 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 COQ5Q5HYK3 327 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 VASNQ6EMK4 673 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 TMEM211Q6ICI0 200 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 DLEU7Q6UYE1 221 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 MTDHQ86UE4 582 aaKnown RBP12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 RETREG3Q86VR2 466 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 MSRB3Q8IXL7 192 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 PEX5LQ8IYB4 626 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 PCYOX1LQ8NBM8 494 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 TOR1AIP2Q8NFQ8 470 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 SLC38A5Q8WUX1 472 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 CGREF1Q99674 301 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 TIMP4Q99727 224 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 VKORC1Q9BQB6 163 aa12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 THUMPD3Q9BV44 507 aaKnown RBP12.72□□□□□ -0.37
GTF3C3-206ENST00000448539 UGT2B28Q9BY64 529 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms