RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 ZIC1Q15915 447 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 TMEFF1Q8IYR6 380 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 GJD3Q8N144 294 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 RAB7BQ96AH8 199 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 ALG8Q9BVK2 526 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 SLA2Q9H6Q3 261 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 IL20Q9NYY1 176 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 PCDHGB7Q9Y5F8 929 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 MYO9BQ13459 2157 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 A0A1W2PPK0 400 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 PROM1O43490 865 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 HYAL3O43820 417 aaPredicted RBP12.03□□□□□ -0.48
SHC1-210ENST00000448116 HMGN1P05114 100 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 HNRNPA1P09651 372 aaKnown RBP eCLIP12.03□□□□□ -0.48
SHC1-210ENST00000448116 ATXN8OSP0DMR3 200 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 IFI30P13284 250 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 BMP7P18075 431 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 SDHBP21912 280 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 PKLRP30613 574 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 ADAM15Q13444 863 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 GAB4Q2WGN9 574 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 DEFB134Q4QY38 66 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 YIF1BQ5BJH7 314 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 CD200R1LQ6Q8B3 271 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 ARIH2OSQ8N7S6 290 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 ZNF485Q8NCK3 441 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 OR2L8Q8NGY9 312 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 DEDD2Q8WXF8 326 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 ZNF764Q96H86 408 aaPredicted RBP12.03□□□□□ -0.48
SHC1-210ENST00000448116 CFHR5Q9BXR6 569 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 HDAC8Q9BY41 377 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 OR52D1Q9H346 318 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 NLGN3Q9NZ94 848 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 PRKAG2Q9UGJ0 569 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 CES1P1Q9UKY3 287 aa12.03□□□□□ -0.48
SHC1-210ENST00000448116 TRAV6A0A075B6T7 132 aa12.02□□□□□ -0.48
SHC1-210ENST00000448116 BTN3A3O00478 584 aa12.02□□□□□ -0.48
SHC1-210ENST00000448116 ZNF888P0CJ79 500 aaPredicted RBP12.02□□□□□ -0.48
SHC1-210ENST00000448116 HLA-DMAP28067 261 aa12.02□□□□□ -0.48
SHC1-210ENST00000448116 CMPK1P30085 196 aa12.02□□□□□ -0.48
SHC1-210ENST00000448116 ACVR1BP36896 505 aa12.02□□□□□ -0.48
SHC1-210ENST00000448116 VEGFBP49765 207 aa12.02□□□□□ -0.48
SHC1-210ENST00000448116 FGL2Q14314 439 aa12.02□□□□□ -0.48
SHC1-210ENST00000448116 CST6Q15828 149 aa12.02□□□□□ -0.48
SHC1-210ENST00000448116 DECR1Q16698 335 aa12.02□□□□□ -0.48
SHC1-210ENST00000448116 MRM1Q6IN84 353 aaKnown RBP12.02□□□□□ -0.48
SHC1-210ENST00000448116 LYPD8Q6UX82 237 aa12.02□□□□□ -0.48
SHC1-210ENST00000448116 MBOAT2Q6ZWT7 520 aa12.02□□□□□ -0.48
SHC1-210ENST00000448116 NRROSQ86YC3 692 aa12.02□□□□□ -0.48
SHC1-210ENST00000448116 CYB561A3Q8NBI2 242 aa12.02□□□□□ -0.48
SHC1-210ENST00000448116 PFN4Q8NHR9 129 aa12.02□□□□□ -0.48
SHC1-210ENST00000448116 LCN9Q8WX39 176 aa12.02□□□□□ -0.48
SHC1-210ENST00000448116 SNAPC3Q92966 411 aa12.02□□□□□ -0.48
SHC1-210ENST00000448116 HCAR1Q9BXC0 346 aa12.02□□□□□ -0.48
SHC1-210ENST00000448116 ATPIF1Q9UII2 106 aa12.02□□□□□ -0.48
SHC1-210ENST00000448116 ZNF443Q9Y2A4 671 aaPredicted RBP12.02□□□□□ -0.48
SHC1-210ENST00000448116 CDH10Q9Y6N8 788 aa12.02□□□□□ -0.48
SHC1-210ENST00000448116 F5P12259 2224 aa12.02□□□□□ -0.49
SHC1-210ENST00000448116 RNF13O43567 381 aa12.02□□□□□ -0.49
SHC1-210ENST00000448116 ERP29P30040 261 aaKnown RBP12.02□□□□□ -0.49
SHC1-210ENST00000448116 OR10A3P58181 314 aa12.02□□□□□ -0.49
SHC1-210ENST00000448116 PDGFRLQ15198 375 aa12.02□□□□□ -0.49
SHC1-210ENST00000448116 C4orf46Q504U0 113 aa12.02□□□□□ -0.49
SHC1-210ENST00000448116 CDC73Q6P1J9 531 aa12.02□□□□□ -0.49
SHC1-210ENST00000448116 SRFBP1Q8NEF9 429 aaKnown RBP12.02□□□□□ -0.49
SHC1-210ENST00000448116 OR52L1Q8NGH7 329 aa12.02□□□□□ -0.49
SHC1-210ENST00000448116 OR51A7Q8NH64 312 aa12.02□□□□□ -0.49
SHC1-210ENST00000448116 OR14C36Q8NHC7 312 aa12.02□□□□□ -0.49
SHC1-210ENST00000448116 DNAJA4Q8WW22 397 aaPredicted RBP12.02□□□□□ -0.49
SHC1-210ENST00000448116 MOAP1Q96BY2 351 aa12.02□□□□□ -0.49
SHC1-210ENST00000448116 RIPOR3Q96MK2 946 aa12.02□□□□□ -0.49
SHC1-210ENST00000448116 IFT27Q9BW83 186 aa12.02□□□□□ -0.49
SHC1-210ENST00000448116 BABAM2Q9NXR7 383 aa12.02□□□□□ -0.49
SHC1-210ENST00000448116 TEKT2Q9UIF3 430 aa12.02□□□□□ -0.49
SHC1-210ENST00000448116 COL4A3Q01955 1670 aa12.02□□□□□ -0.49
SHC1-210ENST00000448116 J3QLW9 94 aa12.02□□□□□ -0.49
SHC1-210ENST00000448116 EEF1E1O43324 174 aaKnown RBP12.02□□□□□ -0.49
SHC1-210ENST00000448116 LANCL1O43813 399 aa12.02□□□□□ -0.49
SHC1-210ENST00000448116 SAGP10523 405 aaPredicted RBP12.02□□□□□ -0.49
SHC1-210ENST00000448116 ARSBP15848 533 aa12.02□□□□□ -0.49
SHC1-210ENST00000448116 ZNF19P17023 458 aa12.02□□□□□ -0.49
SHC1-210ENST00000448116 SF3A2Q15428 464 aaKnown RBP12.02□□□□□ -0.49
SHC1-210ENST00000448116 EOGTQ5NDL2 527 aa12.02□□□□□ -0.49
SHC1-210ENST00000448116 AGBL4Q5VU57 503 aa12.02□□□□□ -0.49
SHC1-210ENST00000448116 FRRS1Q6ZNA5 592 aa12.02□□□□□ -0.49
SHC1-210ENST00000448116 MRGPREQ86SM8 312 aa12.02□□□□□ -0.49
SHC1-210ENST00000448116 NR2C2APQ86WQ0 139 aa12.02□□□□□ -0.49
SHC1-210ENST00000448116 OR4M1Q8NGD0 313 aa12.02□□□□□ -0.49
SHC1-210ENST00000448116 CHFRQ96EP1 664 aa12.02□□□□□ -0.49
SHC1-210ENST00000448116 TEX101Q9BY14 249 aa12.02□□□□□ -0.49
SHC1-210ENST00000448116 ENAMQ9NRM1 1142 aa12.02□□□□□ -0.49
SHC1-210ENST00000448116 SNRNP200O75643 2136 aaKnown RBP12.02□□□□□ -0.49
SHC1-210ENST00000448116 PRSS47A8MTI9 375 aa12.01□□□□□ -0.49
SHC1-210ENST00000448116 E9PI62 339 aa12.01□□□□□ -0.49
SHC1-210ENST00000448116 SEC14L5O43304 696 aa12.01□□□□□ -0.49
SHC1-210ENST00000448116 DNAJB6O75190 326 aa12.01□□□□□ -0.49
SHC1-210ENST00000448116 RGS9O75916 674 aaPredicted RBP12.01□□□□□ -0.49
SHC1-210ENST00000448116 OR2B3O76000 313 aa12.01□□□□□ -0.49
SHC1-210ENST00000448116 GYPBP06028 91 aa12.01□□□□□ -0.49
SHC1-210ENST00000448116 GZMKP49863 264 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms