RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 CASP3P42574 277 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 MASP1P48740 699 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 MEOX1P50221 254 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 ATP12AP54707 1039 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 PLGLB1Q02325 96 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 ZNF117Q03924 483 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 NTRK2Q16620 822 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 TUSC1Q2TAM9 212 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 PRR30Q53SZ7 412 aaPredicted RBP6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 ZNF766Q5HY98 468 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 C1QTNF12Q5T7M4 302 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 ERICH5Q6P6B1 374 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 PGM2L1Q6PCE3 622 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 RTL4Q6ZR62 310 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 ASB18Q6ZVZ8 466 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 KRT73Q86Y46 540 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 APLFQ8IW19 511 aaPredicted RBP6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 SULF2Q8IWU5 870 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 PEX5LQ8IYB4 626 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 CADM2Q8N3J6 435 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 PSD4Q8NDX1 1056 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 PYDC1Q8WXC3 89 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 TMCO6Q96DC7 493 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 OSBPL11Q9BXB4 747 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 PRORYQ9H606 182 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 DENND2DQ9H6A0 471 aaPredicted RBP6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 MTHFD2LQ9H903 347 aaPredicted RBP6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 CACYBPQ9HB71 228 aaKnown RBP6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 PROK2Q9HC23 129 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 ETAA1Q9NY74 926 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 PPP4R1LQ9P1A2 415 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 SUCOQ9UBS9 1254 aaKnown RBP6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 LIPT1Q9Y234 373 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 VDAC3Q9Y277 283 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 GPC6Q9Y625 555 aaPredicted RBP6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 CACNA1AO00555 2505 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 KNTC1P50748 2209 aa6.9□□□□□ -1.3
SF3A3P1-201ENST00000446317 NUP214P35658 2090 aaPredicted RBP6.9□□□□□ -1.3
SF3A3P1-201ENST00000446317 ATMQ13315 3056 aa6.9□□□□□ -1.3
SF3A3P1-201ENST00000446317 ITPR1Q14643 2758 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 AHCTF1Q8WYP5 2266 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 TCRBV5S2A0A599 114 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 AGAP5A6NIR3 686 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 H0Y3Z8 333 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 ADAM10O14672 748 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 TP53I11O14683 189 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 SUV39H1O43463 412 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 PEX1O43933 1283 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 TRAPPC6AO75865 159 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 KRT36O76013 467 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 DBIP07108 87 aaKnown RBP6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 FESP07332 822 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 SP1P08047 785 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 UBL4AP11441 157 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 TBXA2RP21731 343 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 PNLIPRP2P54317 469 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 PSMD4P55036 377 aaKnown RBP6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 UCNP55089 124 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 PCBP3P57721 371 aaKnown RBP6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 EEF1A1P68104 462 aaKnown RBP6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 RBBP4Q09028 425 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 EFR3AQ14156 821 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 TRIM25Q14258 630 aaKnown RBP6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 GANABQ14697 944 aaKnown RBP6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 LAPTM4AQ15012 233 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 NPTX1Q15818 432 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 C3AR1Q16581 482 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 PLEKHN1Q494U1 663 aaPredicted RBP6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 LIN52Q52LA3 116 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 KLHL26Q53HC5 615 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 SLC22A10Q63ZE4 541 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 ARSKQ6UWY0 536 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 PLXDC2Q6UX71 529 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 NUP54Q7Z3B4 507 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 YRDCQ86U90 279 aaKnown RBP6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 TSPYL5Q86VY4 417 aaPredicted RBP6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 CARM1Q86X55 608 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 ZADH2Q8N4Q0 377 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 RBMXL3Q8N7X1 1067 aaKnown RBP6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 LSM14AQ8ND56 463 aaKnown RBP6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 MDS2Q8NDY4 140 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 OR4K17Q8NGC6 315 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 C9orf43Q8TAL5 461 aaPredicted RBP6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 SMPDL3BQ92485 455 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 SLC47A1Q96FL8 570 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 C5orf34Q96MH7 638 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 RNF145Q96MT1 663 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 RAB3IPQ96QF0 476 aaPredicted RBP6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 ZNF607Q96SK3 696 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 SH3GL3Q99963 347 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 DEFB127Q9H1M4 99 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 OCEL1Q9H607 264 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 TMEM185BQ9H7F4 350 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 UBQLN4Q9NRR5 601 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 SACM1LQ9NTJ5 587 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 MAGEL2Q9UJ55 1249 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 MRTO4Q9UKD2 239 aaKnown RBP6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 SLC13A4Q9UKG4 626 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 ABCG2Q9UNQ0 655 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms