RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 LTBP4Q8N2S1 1624 aa3.72□□□□□ -1.81
HMGB1P48-201ENST00000446155 PLEKHG2Q9H7P9 1386 aa3.72□□□□□ -1.81
HMGB1P48-201ENST00000446155 CD109Q6YHK3 1445 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 CUX1P39880 1505 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 ABCA10Q8WWZ4 1543 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 C15orf61A6NNL5 157 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 ZNF724A8MTY0 619 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 NPIPA7E9PJI5 369 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 SPECC1L-ADORA2AF8WAN1 911 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 PDLIM1O00151 329 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 NTN3O00634 580 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 ZNF195O14628 629 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 ARHGEF9O43307 516 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 TNFSF12O43508 249 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 EFNA2O43921 213 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 DFNA5O60443 496 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 NEMFO60524 1076 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 KRT6AP02538 564 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 NPIPA8P0DM63 369 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 FOSL2P15408 326 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 XRCC1P18887 633 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 EDNRAP25101 427 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 NMT1P30419 496 aaKnown RBP3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 SLC1A4P43007 532 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 SNRPD1P62314 119 aaKnown RBP3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 SPAG1Q07617 926 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 WDR43Q15061 677 aaKnown RBP eCLIP3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 SNAI3Q3KNW1 292 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 CYBRD1Q53TN4 286 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 XKR7Q5GH72 579 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 RAET1LQ5VY80 246 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 SCYL2Q6P3W7 929 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 RNASEKQ6P5S7 137 aaKnown RBP3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 VITQ6UXI7 678 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 Q6ZRP5 223 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 CHMP1BQ7LBR1 199 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 PTAR1Q7Z6K3 402 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 MOB3BQ86TA1 216 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 MFSD9Q8NBP5 474 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 ZNF248Q8NDW4 579 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 MAPK15Q8TD08 544 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 HCAR2Q8TDS4 363 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 ST8SIA1Q92185 356 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 TADA1Q96BN2 335 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 C12orf66Q96MD2 445 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 COPS8Q99627 209 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 GPR174Q9BXC1 333 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 STRADBQ9C0K7 418 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 POLE4Q9NR33 117 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 ASIC3Q9UHC3 531 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 CFAP45Q9UL16 551 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 NPIPA1Q9UND3 350 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 POLDIP2Q9Y2S7 368 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 TIMM10BQ9Y5J6 103 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 NPTNQ9Y639 398 aa3.71□□□□□ -1.82
HMGB1P48-201ENST00000446155 MAGI3Q5TCQ9 1506 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 PPIAL4EA0A075B759 164 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 A0A1B0GTQ1 180 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 INPP4BO15327 924 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 SPOPO43791 374 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 SRPX2O60687 465 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 LRATO95237 230 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 CRYGBP07316 175 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 TPM1P09493 284 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 H2BFMP0C1H6 154 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 PPIAL4FP0DN26 164 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 AOC1P19801 751 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 MMP11P24347 488 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 PTBP1P26599 531 aaKnown RBP eCLIP3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 RPL9P32969 192 aaKnown RBP3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 SAA4P35542 130 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 FDFT1P37268 417 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 SSR1P43307 286 aaKnown RBP3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 BDKRB1P46663 353 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 P2RY1P47900 373 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 ATP1B3P54709 279 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 PAX9P55771 341 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 PEX3P56589 373 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 RPS15P62841 145 aaKnown RBP3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 RPS27AP62979 156 aaKnown RBP3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 C1orf61Q13536 156 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 DOC2AQ14183 400 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 EIF2B1Q14232 305 aaKnown RBP3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 AADACL4Q5VUY2 407 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 LIPNQ5VXI9 398 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 SLX4IPQ5VYV7 408 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 ACSM5Q6NUN0 579 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 TSEN54Q7Z6J9 526 aaKnown RBP3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 DHDDSQ86SQ9 333 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 HOGA1Q86XE5 327 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 CLEC4FQ8N1N0 589 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 RAB42Q8N4Z0 105 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 COMMD1Q8N668 190 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 ALLCQ8N6M5 410 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 OR51G2Q8NGK0 314 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 OR6S1Q8NH40 331 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 FAM81AQ8TBF8 368 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 C10orf35Q96D05 121 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 SDSLQ96GA7 329 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms