RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 NHSL2Q5HYW2 709 aa21.73■■□□□ 1.07
C9orf3-207ENST00000445181 COX20Q5RI15 118 aa21.73■■□□□ 1.07
C9orf3-207ENST00000445181 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.73■■□□□ 1.07
C9orf3-207ENST00000445181 RAET1LQ5VY80 246 aa21.73■■□□□ 1.07
C9orf3-207ENST00000445181 VASNQ6EMK4 673 aa21.73■■□□□ 1.07
C9orf3-207ENST00000445181 TMEM211Q6ICI0 200 aa21.73■■□□□ 1.07
C9orf3-207ENST00000445181 AAGABQ6PD74 315 aa21.73■■□□□ 1.07
C9orf3-207ENST00000445181 OLIG3Q7RTU3 272 aa21.73■■□□□ 1.07
C9orf3-207ENST00000445181 PHF10Q8WUB8 498 aaKnown RBP21.73■■□□□ 1.07
C9orf3-207ENST00000445181 C1GALT1C1Q96EU7 318 aa21.73■■□□□ 1.07
C9orf3-207ENST00000445181 AURKBQ96GD4 344 aaPredicted RBP21.73■■□□□ 1.07
C9orf3-207ENST00000445181 NMUR2Q9GZQ4 415 aa21.73■■□□□ 1.07
C9orf3-207ENST00000445181 CHST11Q9NPF2 352 aa21.73■■□□□ 1.07
C9orf3-207ENST00000445181 WDR45Q9Y484 360 aa21.73■■□□□ 1.07
C9orf3-207ENST00000445181 DTNAQ9Y4J8 743 aa21.73■■□□□ 1.07
C9orf3-207ENST00000445181 ITPR2Q14571 2701 aa21.73■■□□□ 1.07
C9orf3-207ENST00000445181 A0A096LPI6 279 aa21.72■■□□□ 1.07
C9orf3-207ENST00000445181 IGLV3-32A0A0A0MS00 114 aa21.72■■□□□ 1.07
C9orf3-207ENST00000445181 GTPBP1O00178 669 aaKnown RBP21.72■■□□□ 1.07
C9orf3-207ENST00000445181 HCRTR2O43614 444 aa21.72■■□□□ 1.07
C9orf3-207ENST00000445181 GABRA1P14867 456 aa21.72■■□□□ 1.07
C9orf3-207ENST00000445181 MSX1P28360 303 aa21.72■■□□□ 1.07
C9orf3-207ENST00000445181 CD226Q15762 336 aa21.72■■□□□ 1.07
C9orf3-207ENST00000445181 KLHL26Q53HC5 615 aa21.72■■□□□ 1.07
C9orf3-207ENST00000445181 ENPP6Q6UWR7 440 aa21.72■■□□□ 1.07
C9orf3-207ENST00000445181 MTERF4Q7Z6M4 381 aaKnown RBP21.72■■□□□ 1.07
C9orf3-207ENST00000445181 PM20D2Q8IYS1 436 aa21.72■■□□□ 1.07
C9orf3-207ENST00000445181 DMRTA2Q96SC8 542 aa21.72■■□□□ 1.07
C9orf3-207ENST00000445181 ZNF350Q9GZX5 532 aa21.72■■□□□ 1.07
C9orf3-207ENST00000445181 PAIP1Q9H074 479 aaKnown RBP21.72■■□□□ 1.07
C9orf3-207ENST00000445181 ZNF385DQ9H6B1 395 aa21.72■■□□□ 1.07
C9orf3-207ENST00000445181 LIPT1Q9Y234 373 aa21.72■■□□□ 1.07
C9orf3-207ENST00000445181 PCDHB14Q9Y5E9 798 aa21.72■■□□□ 1.07
C9orf3-207ENST00000445181 PCNX1Q96RV3 2341 aa21.72■■□□□ 1.07
C9orf3-207ENST00000445181 FAM47E-STBD1D6RA91 191 aa21.71■■□□□ 1.07
C9orf3-207ENST00000445181 ZIC3O60481 467 aa21.71■■□□□ 1.07
C9orf3-207ENST00000445181 DCST1Q5T197 706 aa21.71■■□□□ 1.07
C9orf3-207ENST00000445181 PDZK1Q5T2W1 519 aa21.71■■□□□ 1.07
C9orf3-207ENST00000445181 C1orf185Q5T7R7 199 aa21.71■■□□□ 1.07
C9orf3-207ENST00000445181 B3GNT6Q6ZMB0 384 aa21.71■■□□□ 1.07
C9orf3-207ENST00000445181 ULK2Q8IYT8 1036 aa21.71■■□□□ 1.07
C9orf3-207ENST00000445181 B4GALNT2Q8NHY0 566 aa21.71■■□□□ 1.07
C9orf3-207ENST00000445181 RUBCNLQ9H714 662 aa21.71■■□□□ 1.07
C9orf3-207ENST00000445181 POLE3Q9NRF9 147 aa21.71■■□□□ 1.07
C9orf3-207ENST00000445181 KLHL14Q9P2G3 628 aa21.71■■□□□ 1.07
C9orf3-207ENST00000445181 VDAC3Q9Y277 283 aa21.71■■□□□ 1.07
C9orf3-207ENST00000445181 A0A1W2PP18 115 aa21.7■■□□□ 1.06
C9orf3-207ENST00000445181 NPIPB9F8W1W9 429 aa21.7■■□□□ 1.06
C9orf3-207ENST00000445181 TNFRSF21O75509 655 aa21.7■■□□□ 1.06
C9orf3-207ENST00000445181 H6PDO95479 791 aa21.7■■□□□ 1.06
C9orf3-207ENST00000445181 CLDN14O95500 239 aa21.7■■□□□ 1.06
C9orf3-207ENST00000445181 HOXD4P09016 255 aaPredicted RBP21.7■■□□□ 1.06
C9orf3-207ENST00000445181 NR2F1P10589 423 aa21.7■■□□□ 1.06
C9orf3-207ENST00000445181 MAGEA8P43361 318 aa21.7■■□□□ 1.06
C9orf3-207ENST00000445181 ZNF41P51814 821 aaPredicted RBP21.7■■□□□ 1.06
C9orf3-207ENST00000445181 GFRA1P56159 465 aa21.7■■□□□ 1.06
C9orf3-207ENST00000445181 PMPCAQ10713 525 aa21.7■■□□□ 1.06
C9orf3-207ENST00000445181 FUT5Q11128 374 aa21.7■■□□□ 1.06
C9orf3-207ENST00000445181 CDSNQ15517 529 aa21.7■■□□□ 1.06
C9orf3-207ENST00000445181 SYPL1Q16563 259 aa21.7■■□□□ 1.06
C9orf3-207ENST00000445181 PAGE3Q5JUK9 113 aa21.7■■□□□ 1.06
C9orf3-207ENST00000445181 TYW3Q6IPR3 259 aaKnown RBP21.7■■□□□ 1.06
C9orf3-207ENST00000445181 RPRMLQ8N4K4 120 aa21.7■■□□□ 1.06
C9orf3-207ENST00000445181 ZNF317Q96PQ6 595 aaPredicted RBP21.7■■□□□ 1.06
C9orf3-207ENST00000445181 TRNT1Q96Q11 434 aaKnown RBP21.7■■□□□ 1.06
C9orf3-207ENST00000445181 PRDM14Q9GZV8 571 aa21.7■■□□□ 1.06
C9orf3-207ENST00000445181 RAD21L1Q9H4I0 556 aa21.7■■□□□ 1.06
C9orf3-207ENST00000445181 SLC52A3Q9NQ40 469 aa21.7■■□□□ 1.06
C9orf3-207ENST00000445181 NCOA6Q14686 2063 aaPredicted RBP21.7■■□□□ 1.06
C9orf3-207ENST00000445181 MED12Q93074 2177 aa21.7■■□□□ 1.06
C9orf3-207ENST00000445181 CLIC1O00299 241 aa21.69■■□□□ 1.06
C9orf3-207ENST00000445181 ANGPT2O15123 496 aa21.69■■□□□ 1.06
C9orf3-207ENST00000445181 KIAA0513O60268 411 aa21.69■■□□□ 1.06
C9orf3-207ENST00000445181 NUDT14O95848 222 aa21.69■■□□□ 1.06
C9orf3-207ENST00000445181 ETFAP13804 333 aa21.69■■□□□ 1.06
C9orf3-207ENST00000445181 PRF1P14222 555 aa21.69■■□□□ 1.06
C9orf3-207ENST00000445181 CD1EP15812 388 aa21.69■■□□□ 1.06
C9orf3-207ENST00000445181 CHMP24386 653 aa21.69■■□□□ 1.06
C9orf3-207ENST00000445181 PTGER4P35408 488 aa21.69■■□□□ 1.06
C9orf3-207ENST00000445181 DSTNP60981 165 aa21.69■■□□□ 1.06
C9orf3-207ENST00000445181 ZNF117Q03924 483 aa21.69■■□□□ 1.06
C9orf3-207ENST00000445181 SRYQ05066 204 aa21.69■■□□□ 1.06
C9orf3-207ENST00000445181 SF3B4Q15427 424 aaKnown RBP eCLIP21.69■■□□□ 1.062e-8■■□□□ 12.3
C9orf3-207ENST00000445181 ARSKQ6UWY0 536 aa21.69■■□□□ 1.06
C9orf3-207ENST00000445181 ZNF619Q8N2I2 560 aa21.69■■□□□ 1.06
C9orf3-207ENST00000445181 MARVELD2Q8N4S9 558 aa21.69■■□□□ 1.06
C9orf3-207ENST00000445181 TMCO5AQ8N6Q1 288 aa21.69■■□□□ 1.06
C9orf3-207ENST00000445181 ANKFN1Q8N957 763 aa21.69■■□□□ 1.06
C9orf3-207ENST00000445181 OR5M1Q8NGP8 315 aa21.69■■□□□ 1.06
C9orf3-207ENST00000445181 WDYHV1Q96HA8 205 aa21.69■■□□□ 1.06
C9orf3-207ENST00000445181 PIGQQ9BRB3 760 aa21.69■■□□□ 1.06
C9orf3-207ENST00000445181 MRGBPQ9NV56 204 aa21.69■■□□□ 1.06
C9orf3-207ENST00000445181 COQ3Q9NZJ6 369 aa21.69■■□□□ 1.06
C9orf3-207ENST00000445181 P2RX2Q9UBL9 471 aa21.69■■□□□ 1.06
C9orf3-207ENST00000445181 LEF1Q9UJU2 399 aaPredicted RBP21.69■■□□□ 1.06
C9orf3-207ENST00000445181 CARD8Q9Y2G2 431 aa21.69■■□□□ 1.06
C9orf3-207ENST00000445181 NDUFAF1Q9Y375 327 aa21.69■■□□□ 1.06
C9orf3-207ENST00000445181 A0A087WZY1 265 aa21.68■■□□□ 1.06
C9orf3-207ENST00000445181 SERINC4A6NH21 518 aa21.68■■□□□ 1.06
C9orf3-207ENST00000445181 AHRRA9YTQ3 701 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms