RNA–Protein interactions for RNA: ENST00000444409.1

AP001062.3-202, humanhuman

TSL 2 BASIC

Gene AP001062.3, Length 619 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001062.3-202ENST00000444409 GTPBP8Q8N3Z3 284 aaPredicted RBP12.32□□□□□ -0.44
AP001062.3-202ENST00000444409 TLCD1Q96CP7 247 aa12.32□□□□□ -0.44
AP001062.3-202ENST00000444409 DPY30Q9C005 99 aa12.32□□□□□ -0.44
AP001062.3-202ENST00000444409 THAP1Q9NVV9 213 aa12.32□□□□□ -0.44
AP001062.3-202ENST00000444409 VDAC3Q9Y277 283 aa12.32□□□□□ -0.44
AP001062.3-202ENST00000444409 AP4B1Q9Y6B7 739 aa12.32□□□□□ -0.44
AP001062.3-202ENST00000444409 NUP214P35658 2090 aaPredicted RBP12.32□□□□□ -0.44
AP001062.3-202ENST00000444409 HRNRQ86YZ3 2850 aaPredicted RBP12.32□□□□□ -0.44
AP001062.3-202ENST00000444409 MED12LQ86YW9 2145 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 A0A1W2PNV4 684 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 SHISA8B8ZZ34 492 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 NPIPB9F8W1W9 429 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 SDHDO14521 159 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 SEC14L5O43304 696 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 CRHP06850 196 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 SOAT1P35610 550 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 PHC1P78364 1004 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 SORDQ00796 357 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 DPY19L1Q2PZI1 675 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 PLPPR5Q32ZL2 321 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 FLYWCH1Q4VC44 716 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 KLHL26Q53HC5 615 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 OR2A2Q6IF42 318 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 MTERF4Q7Z6M4 381 aaKnown RBP12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 GGNQ86UU5 652 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 TMEM200AQ86VY9 491 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 KIF18BQ86Y91 864 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 METTL25Q8N6Q8 603 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 ZNF527Q8NB42 609 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 OR5D16Q8NGK9 328 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 RAB3IL1Q8TBN0 382 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 FAM222BQ8WU58 562 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 FIG4Q92562 907 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 ZBTB8AQ96BR9 441 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 OR7D2Q96RA2 312 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 PINK1Q9BXM7 581 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 HOXD1Q9GZZ0 328 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 PIGMQ9H3S5 423 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 SERHL2Q9H4I8 314 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 TMBIM4Q9HC24 238 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 MED17Q9NVC6 651 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 ZNF175Q9Y473 711 aa12.31□□□□□ -0.44
AP001062.3-202ENST00000444409 RNF103-CHMP3A0A140T963 221 aa12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 PRSS51A0A1B0GVH4 220 aa12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 FAM221AA4D161 298 aa12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 HDAC3O15379 428 aa12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 CTAG2O75638 210 aa12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 ALDOCP09972 364 aaKnown RBP12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 PSMA4P25789 261 aaKnown RBP12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 ZNF41P51814 821 aaPredicted RBP12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 CLNS1AP54105 237 aaKnown RBP12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 RPS26P62854 115 aaKnown RBP12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 ZNF117Q03924 483 aa12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 PON3Q15166 354 aa12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 SPANXN4Q5MJ08 99 aa12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 ANXA8L1Q5VT79 327 aa12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 P4HA3Q7Z4N8 544 aa12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 C6orf120Q7Z4R8 191 aa12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 LUZP2Q86TE4 346 aa12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 CHDHQ8NE62 594 aaPredicted RBP12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 VPS37AQ8NEZ2 397 aa12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 OR4A15Q8NGL6 344 aa12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 B4GALNT2Q8NHY0 566 aa12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 MIPOL1Q8TD10 442 aa12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 MGARPQ8TDB4 240 aa12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 SMPDL3BQ92485 455 aa12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 SH3YL1Q96HL8 342 aaPredicted RBP12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 ZNF845Q96IR2 970 aaPredicted RBP12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 SDF2Q99470 211 aa12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 NPAS1Q99742 590 aa12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 KLHDC3Q9BQ90 382 aa12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 RBM24Q9BX46 236 aaKnown RBP12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 RNF122Q9H9V4 155 aa12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 NKIRAS1Q9NYS0 192 aa12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 STOML1Q9UBI4 398 aa12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 PACSIN3Q9UKS6 424 aa12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 PCDHGB4Q9UN71 923 aa12.3□□□□□ -0.44
AP001062.3-202ENST00000444409 NPIPA5A0A0B4J1W7 369 aa12.29□□□□□ -0.44
AP001062.3-202ENST00000444409 TUBAL3A6NHL2 446 aa12.29□□□□□ -0.44
AP001062.3-202ENST00000444409 DUXAA6NLW8 204 aa12.29□□□□□ -0.44
AP001062.3-202ENST00000444409 TRPC5OSA6NMA1 111 aa12.29□□□□□ -0.44
AP001062.3-202ENST00000444409 A8MXE2 369 aa12.29□□□□□ -0.44
AP001062.3-202ENST00000444409 E9PBE3 544 aa12.29□□□□□ -0.44
AP001062.3-202ENST00000444409 NPIPA7E9PJI5 369 aa12.29□□□□□ -0.44
AP001062.3-202ENST00000444409 AK1P00568 194 aa12.29□□□□□ -0.44
AP001062.3-202ENST00000444409 LINGO3P0C6S8 592 aa12.29□□□□□ -0.44
AP001062.3-202ENST00000444409 NPIPA8P0DM63 369 aa12.29□□□□□ -0.44
AP001062.3-202ENST00000444409 MATN1P21941 496 aa12.29□□□□□ -0.44
AP001062.3-202ENST00000444409 ATP12AP54707 1039 aa12.29□□□□□ -0.44
AP001062.3-202ENST00000444409 RPS3AP61247 264 aaKnown RBP12.29□□□□□ -0.44
AP001062.3-202ENST00000444409 CASP8Q14790 479 aa12.29□□□□□ -0.44
AP001062.3-202ENST00000444409 DAZAP2Q15038 168 aaPredicted RBP12.29□□□□□ -0.44
AP001062.3-202ENST00000444409 ATG16L1Q676U5 607 aa12.29□□□□□ -0.44
AP001062.3-202ENST00000444409 CBLN3Q6UW01 205 aa12.29□□□□□ -0.44
AP001062.3-202ENST00000444409 SPATA19Q7Z5L4 167 aa12.29□□□□□ -0.44
AP001062.3-202ENST00000444409 ANKRD46Q86W74 232 aa12.29□□□□□ -0.44
AP001062.3-202ENST00000444409 WDR75Q8IWA0 830 aaKnown RBP12.29□□□□□ -0.44
AP001062.3-202ENST00000444409 CLEC4FQ8N1N0 589 aa12.29□□□□□ -0.44
AP001062.3-202ENST00000444409 FNDC9Q8TBE3 224 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms