RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 DNAJC15Q9Y5T4 150 aa10.58□□□□□ -0.72
TTC28-203ENST00000442232 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 A0A1W2PQD3 144 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 A0A1W2PRB8 838 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 C7orf72A4D263 438 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 GJE1A6NN92 205 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 FAM171A2A8MVW0 826 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 SCAMP2O15127 329 aaKnown RBP10.57□□□□□ -0.72
TTC28-203ENST00000442232 AQP8O94778 261 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 SOX30O94993 753 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 NUDT14O95848 222 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 TUBBP07437 444 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 PABPC4LP0CB38 370 aaKnown RBP10.57□□□□□ -0.72
TTC28-203ENST00000442232 EFNA1P20827 205 aaPredicted RBP10.57□□□□□ -0.72
TTC28-203ENST00000442232 ALDH3A1P30838 453 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 SERPINB5P36952 375 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 EIF1P41567 113 aaKnown RBP10.57□□□□□ -0.72
TTC28-203ENST00000442232 FRKP42685 505 aaPredicted RBP10.57□□□□□ -0.72
TTC28-203ENST00000442232 RAC1P63000 192 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 TP53BP2Q13625 1128 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 LASP1Q14847 261 aaKnown RBP10.57□□□□□ -0.72
TTC28-203ENST00000442232 MLC1Q15049 377 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 ACKR1Q16570 336 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 DUSP5Q16690 384 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 TMEM44Q2T9K0 475 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 PLPPR5Q32ZL2 321 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 LSM12Q3MHD2 195 aaKnown RBP10.57□□□□□ -0.72
TTC28-203ENST00000442232 RFTN2Q52LD8 501 aaPredicted RBP10.57□□□□□ -0.72
TTC28-203ENST00000442232 Q5PR19 223 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 CPTPQ5TA50 214 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 HBMQ6B0K9 141 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 APOOLQ6UXV4 268 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 C20orf204Q6ZNR8 217 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 ESPNLQ6ZVH7 1005 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 GGNQ86UU5 652 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 SLC16A11Q8NCK7 471 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 OR56A1Q8NGH5 318 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 OR4C3Q8NH37 302 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 OR2V1Q8NHB1 315 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 B4GALNT2Q8NHY0 566 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 PPP1R14CQ8TAE6 165 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 PHOSPHO1Q8TCT1 267 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 AGR3Q8TD06 166 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 HOXB13Q92826 284 aaPredicted RBP10.57□□□□□ -0.72
TTC28-203ENST00000442232 FAM120BQ96EK7 910 aaKnown RBP10.57□□□□□ -0.72
TTC28-203ENST00000442232 GIMAP5Q96F15 307 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 OTUB1Q96FW1 271 aaPredicted RBP10.57□□□□□ -0.72
TTC28-203ENST00000442232 RNF145Q96MT1 663 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 STACQ99469 402 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 PIP5K1AQ99755 562 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 TUBB1Q9H4B7 451 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 DLL4Q9NR61 685 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 DUSP22Q9NRW4 184 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 MED17Q9NVC6 651 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 CLEC4AQ9UMR7 237 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 VPS13CQ709C8 3753 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 DSCAMO60469 2012 aa10.57□□□□□ -0.72
TTC28-203ENST00000442232 NIPBLQ6KC79 2804 aaeCLIP10.56□□□□□ -0.72
TTC28-203ENST00000442232 DEFB108AA8MXU0 73 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 TMEM233B4DJY2 109 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 GTPBP1O00178 669 aaKnown RBP10.56□□□□□ -0.72
TTC28-203ENST00000442232 TNFSF11O14788 317 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 CFLARO15519 480 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 CXCL13O43927 109 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 SS18L1O75177 396 aaPredicted RBP10.56□□□□□ -0.72
TTC28-203ENST00000442232 PEX11AO75192 247 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 LYPLA1O75608 230 aaPredicted RBP10.56□□□□□ -0.72
TTC28-203ENST00000442232 CGAP01215 116 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 HMGN2P05204 90 aaKnown RBP10.56□□□□□ -0.72
TTC28-203ENST00000442232 CHRNGP07510 517 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 FGF4P08620 206 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 INHBBP09529 407 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 HOXC12P31275 282 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 CCKARP32238 428 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 SOAT1P35610 550 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 MAP3K8P41279 467 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 ARL13AQ5H913 290 aaPredicted RBP10.56□□□□□ -0.72
TTC28-203ENST00000442232 BEX5Q5H9J7 111 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 CCNJQ5T5M9 372 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 ANKRD34AQ69YU3 496 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 BHLHB9Q6PI77 547 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 BEND4Q6ZU67 534 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 MTERF4Q7Z6M4 381 aaKnown RBP10.56□□□□□ -0.72
TTC28-203ENST00000442232 LRRC75A-AS1Q8N1F1 130 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 ZNF614Q8N883 585 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 BANPQ8N9N5 519 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 FNDC5Q8NAU1 212 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 LRRN4CLQ8ND94 238 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 FAM110BQ8TC76 370 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 ADAMTS15Q8TE58 950 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 OR5P2Q8WZ92 322 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 CDS1Q92903 461 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 ARL8AQ96BM9 186 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 MOAP1Q96BY2 351 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 C16orf58Q96GQ5 468 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 KLHL15Q96M94 604 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 C1orf50Q9BV19 199 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 MECRQ9BV79 373 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 ACTRT3Q9BYD9 372 aa10.56□□□□□ -0.72
TTC28-203ENST00000442232 HOXD1Q9GZZ0 328 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms