RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 TMEM229AB2RXF0 380 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 HNRNPCL2B2RXH8 293 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 HNRNPCL3B7ZW38 293 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 CCNKO75909 580 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 SOX30O94993 753 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 PRSS23O95084 383 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 MFN2O95140 757 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 CBX7O95931 251 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 PTTG1O95997 202 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 HNRNPCL4P0DMR1 293 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 CCKBRP32239 447 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 HTR2BP41595 481 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 KCNJ10P78508 379 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 E2F1Q01094 437 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 TCF15Q12870 199 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 DUSP5Q16690 384 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 Q5BKY6 102 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 NHSL2Q5HYW2 709 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 KRT80Q6KB66 452 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 LIX1LQ8IVB5 337 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 PRSS58Q8IYP2 241 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 SLC38A9Q8NBW4 561 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 OR52R1Q8NGF1 315 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 SVIPQ8NHG7 77 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 LRRC20Q8TCA0 184 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 RNF31Q96EP0 1072 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 CNPPD1Q9BV87 410 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 COL25A1Q9BXS0 654 aaPredicted RBP7.51□□□□□ -1.21
CCDC39-201ENST00000442201 DUSP22Q9NRW4 184 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 SEC14L3Q9UDX4 400 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 IGKV3D-11A0A0A0MRZ8 115 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 PRSS44E7EML9 344 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 NOL3O60936 208 aaKnown RBP7.5□□□□□ -1.21
CCDC39-201ENST00000442201 LRP3O75074 770 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 SEMG1P04279 462 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 CHRM4P08173 479 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 ACP2P11117 423 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 ZNF3P17036 446 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 S1PR1P21453 382 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 PGDP52209 483 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 PDX1P52945 283 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 DCDP81605 110 aaKnown RBP7.5□□□□□ -1.21
CCDC39-201ENST00000442201 VLDLRP98155 873 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 FUT5Q11128 374 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 ZNF155Q12901 538 aaPredicted RBP7.5□□□□□ -1.21
CCDC39-201ENST00000442201 ILKQ13418 452 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 ZNHIT3Q15649 155 aaPredicted RBP7.5□□□□□ -1.21
CCDC39-201ENST00000442201 HEPHL1Q6MZM0 1159 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 ALKBH2Q6NS38 261 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 PIWIL3Q7Z3Z3 882 aaKnown RBP7.5□□□□□ -1.21
CCDC39-201ENST00000442201 CCDC36Q8IYA8 594 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 BMPERQ8N8U9 685 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 GEMIN6Q8WXD5 167 aaKnown RBP7.5□□□□□ -1.21
CCDC39-201ENST00000442201 TFAP2CQ92754 450 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 CDS1Q92903 461 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 TMBIM1Q969X1 311 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 C7orf34Q96L11 122 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 MOGAT1Q96PD6 335 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 STACQ99469 402 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 PIP5K1AQ99755 562 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 CMKLR1Q99788 373 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.5□□□□□ -1.21
CCDC39-201ENST00000442201 SLC22A11Q9NSA0 550 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 CTSFQ9UBX1 484 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 PADI2Q9Y2J8 665 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 A8MVJ9 347 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 PRAMEF2O60811 474 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 CPNE3O75131 537 aaKnown RBP7.5□□□□□ -1.21
CCDC39-201ENST00000442201 SELLP14151 372 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 SSTR4P31391 388 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 RORAP35398 523 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 MC2RQ01718 297 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 NSDHLQ15738 373 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 NRF1Q16656 503 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 MLIPQ5VWP3 458 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 OR2T5Q6IEZ7 315 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 COX15Q7KZN9 410 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 HDDC2Q7Z4H3 204 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 ZDHHC13Q8IUH4 622 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 NKAIN4Q8IVV8 208 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 TAGAPQ8N103 731 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 CBR4Q8N4T8 237 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 PACRGLQ8N7B6 248 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 COX18Q8N8Q8 333 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 ZNF680Q8NEM1 530 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 PRSS33Q8NF86 280 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 IL17RDQ8NFM7 739 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 OR2T29Q8NH02 315 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 STT3BQ8TCJ2 826 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 GPR151Q8TDV0 419 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 PROX1Q92786 737 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 TSLPQ969D9 159 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 ST6GAL2Q96JF0 529 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 CITED4Q96RK1 184 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 LRFN3Q9BTN0 628 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 YTHDF1Q9BYJ9 559 aaKnown RBP7.5□□□□□ -1.21
CCDC39-201ENST00000442201 TGIF2Q9GZN2 237 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 SLC38A1Q9H2H9 487 aa7.5□□□□□ -1.21
CCDC39-201ENST00000442201 PNO1Q9NRX1 252 aaKnown RBP7.5□□□□□ -1.21
CCDC39-201ENST00000442201 TOR4AQ9NXH8 423 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms