RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 DCAF12L1Q5VU92 463 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 C11orf63Q6NUN7 778 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 ZDHHC24Q6UX98 284 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 TTLL10Q6ZVT0 673 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 GPBP1Q86WP2 473 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 RNF130Q86XS8 419 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 EXD3Q8N9H8 876 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 BPIFB1Q8TDL5 484 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 C12orf42Q96LP6 360 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 MED18Q9BUE0 208 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 PRR14Q9BWN1 585 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 RHOFQ9HBH0 211 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 BIN3Q9NQY0 253 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 BABAM2Q9NXR7 383 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 NAGPAQ9UK23 515 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 SERPINE2P07093 398 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 FCGR2BP31994 310 aaPredicted RBP9.79□□□□□ -0.84
SYNE2-206ENST00000441438 MAGEA3P43357 314 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 CHN2P52757 468 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 KCNK10P57789 538 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 CCL7P80098 99 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 IL5RAQ01344 420 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 RBBP4Q09028 425 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 DLG1Q12959 904 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 KRT81Q14533 505 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 ZNF169Q14929 603 aaPredicted RBP9.79□□□□□ -0.84
SYNE2-206ENST00000441438 PCOLCEQ15113 449 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 ASPHD2Q6ICH7 369 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 LIPIQ6XZB0 460 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 WFDC3Q8IUB2 231 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 SIAH3Q8IW03 269 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 C1orf87Q8N0U7 546 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 FITM2Q8N6M3 262 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 RAD54LQ92698 747 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 RAX2Q96IS3 184 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 CCDC140Q96MF4 163 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 VAT1Q99536 393 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 SLC35A5Q9BS91 424 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 GGACTQ9BVM4 153 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 CYSLTR2Q9NS75 346 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 DKKL1Q9UK85 242 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 MRTO4Q9UKD2 239 aaKnown RBP9.79□□□□□ -0.84
SYNE2-206ENST00000441438 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 CXCR6O00574 342 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 ZNF749O43361 778 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 FCGR2AP12318 317 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 SOX18P35713 384 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 CEACAM6P40199 344 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 RBM34P42696 430 aaKnown RBP9.79□□□□□ -0.84
SYNE2-206ENST00000441438 SERPINB10P48595 397 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 RBP2P50120 134 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 KRR1Q13601 381 aaKnown RBP9.79□□□□□ -0.84
SYNE2-206ENST00000441438 TMEM201Q5SNT2 666 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 UBE2UQ5VVX9 321 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 TRIQKQ629K1 86 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 TMEM144Q7Z5S9 345 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 ARRDC1Q8N5I2 433 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 FAR1Q8WVX9 515 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 DNAJC9Q8WXX5 260 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 FSD1LQ9BXM9 530 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 SLC2A11Q9BYW1 496 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 DYRK4Q9NR20 520 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 SLC2A8Q9NY64 477 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 KLHL21Q9UJP4 597 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 SAC3D1A6NKF1 404 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 FAM25AB3EWG3 89 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 FAM25CB3EWG5 89 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 FAM25GB3EWG6 89 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 HOXC4P09017 264 aaPredicted RBP9.79□□□□□ -0.84
SYNE2-206ENST00000441438 DAOP14920 347 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 NR4A1P22736 598 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 FPR3P25089 353 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 EFNA5P52803 228 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 SSBP2P81877 361 aaPredicted RBP9.79□□□□□ -0.84
SYNE2-206ENST00000441438 FOLH1Q04609 750 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 OR4D1Q15615 310 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 FBXW9Q5XUX1 488 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 CALHM1Q8IU99 346 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 PPWD1Q96BP3 646 aaKnown RBP9.79□□□□□ -0.84
SYNE2-206ENST00000441438 ZNF641Q96N77 438 aaPredicted RBP9.79□□□□□ -0.84
SYNE2-206ENST00000441438 ST6GALNAC5Q9BVH7 336 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 DDA1Q9BW61 102 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 GPAMQ9HCL2 828 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 THSD1Q9NS62 852 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 GLTPQ9NZD2 209 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 PITPNC1Q9UKF7 332 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 HCFC2Q9Y5Z7 792 aa9.79□□□□□ -0.84
SYNE2-206ENST00000441438 NCANO14594 1321 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 HYKKA2RU49 373 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 CGB1A6NKQ9 187 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 TEX22C9J3V5 150 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 RAB27BO00194 218 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 CA3P07451 260 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 VSX2P58304 361 aaPredicted RBP9.78□□□□□ -0.84
SYNE2-206ENST00000441438 RPS7P62081 194 aaKnown RBP9.78□□□□□ -0.84
SYNE2-206ENST00000441438 VLDLRP98155 873 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 DPYSL3Q14195 570 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 DLG2Q15700 870 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 DENND1BQ6P3S1 775 aa9.78□□□□□ -0.84
SYNE2-206ENST00000441438 Q6ZPB1 254 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 1084.2 ms