RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 CLDN20P56880 219 aa17.9■□□□□ 0.46
SHROOM1-204ENST00000440118 STX3Q13277 289 aa17.9■□□□□ 0.46
SHROOM1-204ENST00000440118 PON3Q15166 354 aa17.9■□□□□ 0.46
SHROOM1-204ENST00000440118 DCST2Q5T1A1 773 aa17.9■□□□□ 0.46
SHROOM1-204ENST00000440118 WDR75Q8IWA0 830 aaKnown RBP17.9■□□□□ 0.46
SHROOM1-204ENST00000440118 B4GALNT2Q8NHY0 566 aa17.9■□□□□ 0.46
SHROOM1-204ENST00000440118 LINC01560Q8TB33 94 aa17.9■□□□□ 0.46
SHROOM1-204ENST00000440118 PHOSPHO1Q8TCT1 267 aa17.9■□□□□ 0.46
SHROOM1-204ENST00000440118 NUDT8Q8WV74 236 aa17.9■□□□□ 0.46
SHROOM1-204ENST00000440118 ZBTB8AQ96BR9 441 aa17.9■□□□□ 0.46
SHROOM1-204ENST00000440118 COQ8BQ96D53 544 aa17.9■□□□□ 0.46
SHROOM1-204ENST00000440118 DPY30Q9C005 99 aa17.9■□□□□ 0.46
SHROOM1-204ENST00000440118 AKTIPQ9H8T0 292 aa17.9■□□□□ 0.46
SHROOM1-204ENST00000440118 FBXO34Q9NWN3 711 aa17.9■□□□□ 0.46
SHROOM1-204ENST00000440118 ASIC5Q9NY37 505 aa17.9■□□□□ 0.46
SHROOM1-204ENST00000440118 JKAMPQ9P055 326 aa17.9■□□□□ 0.46
SHROOM1-204ENST00000440118 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.9■□□□□ 0.46
SHROOM1-204ENST00000440118 ZNF175Q9Y473 711 aa17.9■□□□□ 0.46
SHROOM1-204ENST00000440118 ACTL7BQ9Y614 415 aa17.9■□□□□ 0.46
SHROOM1-204ENST00000440118 AKAP9Q99996 3911 aa17.9■□□□□ 0.46
SHROOM1-204ENST00000440118 TNFRSF21O75509 655 aa17.89■□□□□ 0.45
SHROOM1-204ENST00000440118 SOX30O94993 753 aa17.89■□□□□ 0.45
SHROOM1-204ENST00000440118 PLGP00747 810 aaPredicted RBP17.89■□□□□ 0.45
SHROOM1-204ENST00000440118 CRHP06850 196 aa17.89■□□□□ 0.45
SHROOM1-204ENST00000440118 EPXP11678 715 aa17.89■□□□□ 0.45
SHROOM1-204ENST00000440118 DNAJA1P31689 397 aaKnown RBP17.89■□□□□ 0.45
SHROOM1-204ENST00000440118 CLDN15P56746 228 aa17.89■□□□□ 0.45
SHROOM1-204ENST00000440118 SMU1Q2TAY7 513 aa17.89■□□□□ 0.45
SHROOM1-204ENST00000440118 TMCO5AQ8N6Q1 288 aa17.89■□□□□ 0.45
SHROOM1-204ENST00000440118 OR4A15Q8NGL6 344 aa17.89■□□□□ 0.45
SHROOM1-204ENST00000440118 PSMA8Q8TAA3 256 aa17.89■□□□□ 0.45
SHROOM1-204ENST00000440118 FNDC9Q8TBE3 224 aa17.89■□□□□ 0.45
SHROOM1-204ENST00000440118 FAM110BQ8TC76 370 aa17.89■□□□□ 0.45
SHROOM1-204ENST00000440118 FIG4Q92562 907 aa17.89■□□□□ 0.45
SHROOM1-204ENST00000440118 PGM2Q96G03 612 aa17.89■□□□□ 0.45
SHROOM1-204ENST00000440118 ZNF845Q96IR2 970 aaPredicted RBP17.89■□□□□ 0.45
SHROOM1-204ENST00000440118 NUF2Q9BZD4 464 aa17.89■□□□□ 0.45
SHROOM1-204ENST00000440118 HOXD1Q9GZZ0 328 aa17.89■□□□□ 0.45
SHROOM1-204ENST00000440118 RASSF1Q9NS23 344 aa17.89■□□□□ 0.45
SHROOM1-204ENST00000440118 NPIPA5A0A0B4J1W7 369 aa17.88■□□□□ 0.45
SHROOM1-204ENST00000440118 RNF103-CHMP3A0A140T963 221 aa17.88■□□□□ 0.45
SHROOM1-204ENST00000440118 A0A1W2PQD3 144 aa17.88■□□□□ 0.45
SHROOM1-204ENST00000440118 NPIPA7E9PJI5 369 aa17.88■□□□□ 0.45
SHROOM1-204ENST00000440118 ERLIN1O75477 346 aa17.88■□□□□ 0.45
SHROOM1-204ENST00000440118 DHRS4L1P0CG22 281 aa17.88■□□□□ 0.45
SHROOM1-204ENST00000440118 NPIPA8P0DM63 369 aa17.88■□□□□ 0.45
SHROOM1-204ENST00000440118 KCNJ5P48544 419 aa17.88■□□□□ 0.45
SHROOM1-204ENST00000440118 RNF144AP50876 292 aaPredicted RBP17.88■□□□□ 0.45
SHROOM1-204ENST00000440118 ART1P52961 327 aa17.88■□□□□ 0.45
SHROOM1-204ENST00000440118 HBA1P69905 142 aa17.88■□□□□ 0.45
SHROOM1-204ENST00000440118 FGFBP1Q14512 234 aa17.88■□□□□ 0.45
SHROOM1-204ENST00000440118 OR4F3Q6IEY1 312 aa17.88■□□□□ 0.45
SHROOM1-204ENST00000440118 RIMKLAQ8IXN7 391 aa17.88■□□□□ 0.45
SHROOM1-204ENST00000440118 VPS37AQ8NEZ2 397 aa17.88■□□□□ 0.45
SHROOM1-204ENST00000440118 MGARPQ8TDB4 240 aa17.88■□□□□ 0.45
SHROOM1-204ENST00000440118 ACTRT2Q8TDY3 377 aa17.88■□□□□ 0.45
SHROOM1-204ENST00000440118 SLC35G5Q96KT7 338 aa17.88■□□□□ 0.45
SHROOM1-204ENST00000440118 RNF145Q96MT1 663 aa17.88■□□□□ 0.45
SHROOM1-204ENST00000440118 OR7D2Q96RA2 312 aa17.88■□□□□ 0.45
SHROOM1-204ENST00000440118 TMEM185BQ9H7F4 350 aa17.88■□□□□ 0.45
SHROOM1-204ENST00000440118 MED17Q9NVC6 651 aa17.88■□□□□ 0.45
SHROOM1-204ENST00000440118 GPATCH2Q9NW75 528 aa17.88■□□□□ 0.45
SHROOM1-204ENST00000440118 MCTS1Q9ULC4 181 aaKnown RBP17.88■□□□□ 0.45
SHROOM1-204ENST00000440118 ABCA4P78363 2273 aa17.87■□□□□ 0.45
SHROOM1-204ENST00000440118 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.87■□□□□ 0.45
SHROOM1-204ENST00000440118 GTPBP1O00178 669 aaKnown RBP17.87■□□□□ 0.45
SHROOM1-204ENST00000440118 MSTNO14793 375 aa17.87■□□□□ 0.45
SHROOM1-204ENST00000440118 CASKO14936 926 aa17.87■□□□□ 0.45
SHROOM1-204ENST00000440118 TNFSF13O75888 250 aa17.87■□□□□ 0.45
SHROOM1-204ENST00000440118 SYNGR4O95473 234 aa17.87■□□□□ 0.45
SHROOM1-204ENST00000440118 LBPP18428 481 aa17.87■□□□□ 0.45
SHROOM1-204ENST00000440118 CCR4P51679 360 aa17.87■□□□□ 0.45
SHROOM1-204ENST00000440118 C21orf58P58505 322 aa17.87■□□□□ 0.45
SHROOM1-204ENST00000440118 RPS26P62854 115 aaKnown RBP17.87■□□□□ 0.45
SHROOM1-204ENST00000440118 CD226Q15762 336 aa17.87■□□□□ 0.45
SHROOM1-204ENST00000440118 PLPPR5Q32ZL2 321 aa17.87■□□□□ 0.45
SHROOM1-204ENST00000440118 VWA1Q6PCB0 445 aa17.87■□□□□ 0.45
SHROOM1-204ENST00000440118 CAMKMTQ7Z624 323 aa17.87■□□□□ 0.45
SHROOM1-204ENST00000440118 MTERF4Q7Z6M4 381 aaKnown RBP17.87■□□□□ 0.45
SHROOM1-204ENST00000440118 CLECL1Q8IZS7 167 aa17.87■□□□□ 0.45
SHROOM1-204ENST00000440118 GTPBP8Q8N3Z3 284 aaPredicted RBP17.87■□□□□ 0.45
SHROOM1-204ENST00000440118 METTL25Q8N6Q8 603 aa17.87■□□□□ 0.45
SHROOM1-204ENST00000440118 OR5D16Q8NGK9 328 aa17.87■□□□□ 0.45
SHROOM1-204ENST00000440118 SORT1Q99523 831 aa17.87■□□□□ 0.45
SHROOM1-204ENST00000440118 PAQR5Q9NXK6 330 aaPredicted RBP17.87■□□□□ 0.45
SHROOM1-204ENST00000440118 NDRG3Q9UGV2 375 aa17.87■□□□□ 0.45
SHROOM1-204ENST00000440118 HRNRQ86YZ3 2850 aaPredicted RBP17.86■□□□□ 0.45
SHROOM1-204ENST00000440118 SH3D21A4FU49 640 aa17.86■□□□□ 0.45
SHROOM1-204ENST00000440118 RNASET2O00584 256 aaKnown RBP17.86■□□□□ 0.45
SHROOM1-204ENST00000440118 OPN1LWP04000 364 aa17.86■□□□□ 0.45
SHROOM1-204ENST00000440118 CD1EP15812 388 aa17.86■□□□□ 0.45
SHROOM1-204ENST00000440118 CLNS1AP54105 237 aaKnown RBP17.86■□□□□ 0.45
SHROOM1-204ENST00000440118 ZNF117Q03924 483 aa17.86■□□□□ 0.45
SHROOM1-204ENST00000440118 BST1Q10588 318 aa17.86■□□□□ 0.45
SHROOM1-204ENST00000440118 EXOSC6Q5RKV6 272 aaKnown RBP17.86■□□□□ 0.45
SHROOM1-204ENST00000440118 PDSS1Q5T2R2 415 aa17.86■□□□□ 0.45
SHROOM1-204ENST00000440118 C16orf62Q7Z3J2 963 aa17.86■□□□□ 0.45
SHROOM1-204ENST00000440118 ANKRD46Q86W74 232 aa17.86■□□□□ 0.45
SHROOM1-204ENST00000440118 CDC20BQ86Y33 519 aa17.86■□□□□ 0.45
SHROOM1-204ENST00000440118 SLC39A3Q9BRY0 314 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms