RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 POFUT2Q9Y2G5 429 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 IFT52Q9Y366 437 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 DSPPQ9NZW4 1301 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 PRAMEF25A6NGN4 478 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 M0R3H8 397 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 DYRK3O43781 588 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 PRAMEF2O60811 474 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 PRB1P04280 392 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 IFNA16P05015 189 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 H1F0P07305 194 aaKnown RBP13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 CYC1P08574 325 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 CT62P0C5K7 136 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 SMIM18P0DKX4 95 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 ITGA3P26006 1051 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 PRKAR1BP31321 381 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 IFNA8P32881 189 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 POU6F2P78424 691 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 AIMP2Q13155 320 aaKnown RBP13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 LARS2Q15031 903 aaKnown RBP13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 MICAQ29983 383 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 SOWAHCQ53LP3 525 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 COLEC12Q5KU26 742 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 DCST2Q5T1A1 773 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 PAPD4Q6PIY7 484 aaKnown RBP13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 DHRS4L2Q6PKH6 230 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 THAP5Q7Z6K1 395 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 ZNF605Q86T29 641 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 GALNT16Q8N428 558 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 CLEC1AQ8NC01 280 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 C7orf57Q8NEG2 295 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 TSPAN14Q8NG11 270 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 OR52P1PQ8NH57 321 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 GPR151Q8TDV0 419 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 IMMP1LQ96LU5 166 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 APOL4Q9BPW4 351 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 YTHDF1Q9BYJ9 559 aaKnown RBP13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 CXorf21Q9HAI6 301 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 ATP13A2Q9NQ11 1180 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 PAPOLBQ9NRJ5 636 aaKnown RBP13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 PNO1Q9NRX1 252 aaKnown RBP13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 GPR83Q9NYM4 423 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 ENOPH1Q9UHY7 261 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 ZNF232Q9UNY5 417 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 ZNF443Q9Y2A4 671 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 TP53TG5Q9Y2B4 290 aa13.43□□□□□ -0.26
TNFRSF1A-204ENST00000440083 LOC100130705A0A1B0GUX0 176 aa13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 DPPA5A6NC42 116 aa13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 ARRDC5A6NEK1 342 aa13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 A6NHS1 94 aa13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 MKRN2OSH3BPM6 223 aa13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 SLC16A6O15403 523 aa13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 MITFO75030 526 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 NME6O75414 186 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 STX11O75558 287 aa13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 CEACAM4O75871 244 aa13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 CBX7O95931 251 aa13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 LGI1O95970 557 aa13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 CLPTM1O96005 669 aa13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 CYP4B1P13584 511 aa13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 TNNI3P19429 210 aa13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 MGAT2Q10469 447 aa13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 LIN52Q52LA3 116 aa13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 FRRS1Q6ZNA5 592 aa13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 HMGN2P46Q86SG4 172 aa13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 ZNF619Q8N2I2 560 aa13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 CHDHQ8NE62 594 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 C9orf43Q8TAL5 461 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 CTHRC1Q96CG8 243 aa13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 THOC3Q96J01 351 aaKnown RBP13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 PRRC1Q96M27 445 aa13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 MUS81Q96NY9 551 aa13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 ALPK1Q96QP1 1244 aa13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 CNPPD1Q9BV87 410 aa13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 FNDC11Q9BVV2 318 aa13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 FOLH1BQ9HBA9 442 aa13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 POLE3Q9NRF9 147 aa13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 RHCGQ9UBD6 479 aa13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 SMG1Q96Q15 3661 aaKnown RBP13.42□□□□□ -0.26
TNFRSF1A-204ENST00000440083 CNTRLQ7Z7A1 2325 aa13.41□□□□□ -0.26
TNFRSF1A-204ENST00000440083 BOD1L1Q8NFC6 3051 aa13.41□□□□□ -0.26
TNFRSF1A-204ENST00000440083 FAAHO00519 579 aa13.41□□□□□ -0.26
TNFRSF1A-204ENST00000440083 PCDH17O14917 1159 aa13.41□□□□□ -0.26
TNFRSF1A-204ENST00000440083 OXSR1O95747 527 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF1A-204ENST00000440083 DBIP07108 87 aaKnown RBP13.41□□□□□ -0.26
TNFRSF1A-204ENST00000440083 THBS1P07996 1170 aa13.41□□□□□ -0.26
TNFRSF1A-204ENST00000440083 ATP6V1B1P15313 513 aa13.41□□□□□ -0.26
TNFRSF1A-204ENST00000440083 GALNSP34059 522 aa13.41□□□□□ -0.26
TNFRSF1A-204ENST00000440083 GABRA3P34903 492 aa13.41□□□□□ -0.26
TNFRSF1A-204ENST00000440083 PIGAP37287 484 aa13.41□□□□□ -0.26
TNFRSF1A-204ENST00000440083 PGDP52209 483 aa13.41□□□□□ -0.26
TNFRSF1A-204ENST00000440083 UGT2B15P54855 530 aa13.41□□□□□ -0.26
TNFRSF1A-204ENST00000440083 IL5RAQ01344 420 aa13.41□□□□□ -0.26
TNFRSF1A-204ENST00000440083 TOP3AQ13472 1001 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF1A-204ENST00000440083 KEAP1Q14145 624 aa13.41□□□□□ -0.26
TNFRSF1A-204ENST00000440083 ZNF267Q14586 743 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF1A-204ENST00000440083 GPR68Q15743 365 aa13.41□□□□□ -0.26
TNFRSF1A-204ENST00000440083 BTBD16Q32M84 506 aa13.41□□□□□ -0.26
TNFRSF1A-204ENST00000440083 RBM48Q5RL73 367 aaKnown RBP13.41□□□□□ -0.26
TNFRSF1A-204ENST00000440083 DCST1Q5T197 706 aa13.41□□□□□ -0.26
TNFRSF1A-204ENST00000440083 ZNF691Q5VV52 312 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms