RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 HNRNPCL3B7ZW38 293 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 C5orf58C9J3I9 102 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 C9J4A7 227 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 PTGES3LE9PB15 166 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 K7ENP7 123 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 ZNHIT1O43257 154 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 AIREO43918 545 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 MITFO75030 526 aaPredicted RBP4.42□□□□□ -1.7
EDEM3-203ENST00000439962 RDH16O75452 317 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 MFN2O95140 757 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 LGI1O95970 557 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 HNRNPCL4P0DMR1 293 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 ITGA3P26006 1051 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 STAT5AP42229 794 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 RANBP1P43487 201 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 MAPK12P53778 367 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 TAS2R50P59544 299 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 PLIN5Q00G26 463 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 TRA2AQ13595 282 aaKnown RBP eCLIP4.42□□□□□ -1.7
EDEM3-203ENST00000439962 IGFBP7Q16270 282 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 TIGD6Q17RP2 521 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 TRIM16LQ309B1 348 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 NKAIN1Q4KMZ8 207 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 SOWAHCQ53LP3 525 aaPredicted RBP4.42□□□□□ -1.7
EDEM3-203ENST00000439962 FBXO42Q6P3S6 717 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 INO80CQ6PI98 192 aaPredicted RBP4.42□□□□□ -1.7
EDEM3-203ENST00000439962 ISLR2Q6UXK2 745 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 VN1R5Q7Z5H4 357 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 CCDC71Q8IV32 467 aaPredicted RBP4.42□□□□□ -1.7
EDEM3-203ENST00000439962 FAM26EQ8N5C1 309 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 ESX1Q8N693 406 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 SIRT6Q8N6T7 355 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 CLDN22Q8N7P3 220 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 EXD3Q8N9H8 876 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 OR8J1Q8NGP2 316 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 NFKBIDQ8NI38 313 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 ZFPM2Q8WW38 1151 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 KLHL6Q8WZ60 621 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 GGHQ92820 318 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 ITFG2Q969R8 447 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 TM4SF18Q96CE8 201 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 TCTN2Q96GX1 697 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 PEX11GQ96HA9 241 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 WDFY2Q96P53 400 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 TRNT1Q96Q11 434 aaKnown RBP4.42□□□□□ -1.7
EDEM3-203ENST00000439962 ZFYVE21Q9BQ24 234 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 SORBS1Q9BX66 1292 aaKnown RBP4.42□□□□□ -1.7
EDEM3-203ENST00000439962 POLDIP3Q9BY77 421 aaKnown RBP4.42□□□□□ -1.7
EDEM3-203ENST00000439962 UCK2Q9BZX2 261 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 CCDC90BQ9GZT6 254 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 DSN1Q9H410 356 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 ZBTB20Q9HC78 741 aaPredicted RBP4.42□□□□□ -1.7
EDEM3-203ENST00000439962 MED17Q9NVC6 651 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 MKL2Q9ULH7 1088 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 FARSAQ9Y285 508 aaKnown RBP4.42□□□□□ -1.7
EDEM3-203ENST00000439962 U3KQV3 271 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 CCDC168Q8NDH2 2452 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 A0A0A6YYD5 115 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 GLOD5A6NK44 160 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 WASHC1A8K0Z3 465 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 FAM227AF5H4B4 570 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 PLPP1O14494 284 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 SLC28A2O43868 658 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 XPNPEP2O43895 674 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 UPK1BO75841 260 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 DXOO77932 396 aaKnown RBP4.42□□□□□ -1.7
EDEM3-203ENST00000439962 NADKO95544 446 aaPredicted RBP4.42□□□□□ -1.7
EDEM3-203ENST00000439962 TGFB1P01137 390 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 HNRNPCP07910 306 aaKnown RBP eCLIP4.42□□□□□ -1.7
EDEM3-203ENST00000439962 IL3P08700 152 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 ETFAP13804 333 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 PSMB9P28065 219 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 FMO3P31513 532 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 UGT2B15P54855 530 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 DCDP81605 110 aaKnown RBP4.42□□□□□ -1.7
EDEM3-203ENST00000439962 PRDX1Q06830 199 aaKnown RBP4.42□□□□□ -1.7
EDEM3-203ENST00000439962 IL11RAQ14626 422 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 KIR2DS3Q14952 304 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 SEC23BQ15437 767 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 SLC5A12Q1EHB4 618 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 MPEG1Q2M385 716 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 EXOC3L2Q2M3D2 409 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 ENTPD8Q5MY95 495 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 ARMC4Q5T2S8 1044 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 PLAG1Q6DJT9 500 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 PLEKHG7Q6ZR37 379 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 GALNT5Q7Z7M9 940 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 STX19Q8N4C7 294 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 SLC5A8Q8N695 610 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 ZBTB8BQ8NAP8 495 aaPredicted RBP4.42□□□□□ -1.7
EDEM3-203ENST00000439962 PROKR2Q8NFJ6 384 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 CDC26Q8NHZ8 85 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 SUN3Q8TAQ9 357 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 ZNF675Q8TD23 568 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 SLC22A18Q96BI1 424 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 MED18Q9BUE0 208 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 MND1Q9BWT6 205 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 TAPBPLQ9BX59 468 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 PINK1Q9BXM7 581 aa4.42□□□□□ -1.7
EDEM3-203ENST00000439962 SLC6A16Q9GZN6 736 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms