RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 GATA5Q9BWX5 397 aaPredicted RBP9.31□□□□□ -0.92
CPNE1-214ENST00000435747 RTN4RQ9BZR6 473 aa9.31□□□□□ -0.92
CPNE1-214ENST00000435747 STMN4Q9H169 189 aaPredicted RBP9.31□□□□□ -0.92
CPNE1-214ENST00000435747 GLIPR2Q9H4G4 154 aa9.31□□□□□ -0.92
CPNE1-214ENST00000435747 METTL7AQ9H8H3 244 aa9.31□□□□□ -0.92
CPNE1-214ENST00000435747 MANSC1Q9H8J5 431 aa9.31□□□□□ -0.92
CPNE1-214ENST00000435747 LGALS13Q9UHV8 139 aa9.31□□□□□ -0.92
CPNE1-214ENST00000435747 FBXL2Q9UKC9 423 aa9.31□□□□□ -0.92
CPNE1-214ENST00000435747 MRPS18CQ9Y3D5 142 aaKnown RBP9.31□□□□□ -0.92
CPNE1-214ENST00000435747 RNF115Q9Y4L5 304 aa9.31□□□□□ -0.92
CPNE1-214ENST00000435747 DNAJC15Q9Y5T4 150 aa9.31□□□□□ -0.92
CPNE1-214ENST00000435747 SMIM23A6NLE4 172 aa9.3□□□□□ -0.92
CPNE1-214ENST00000435747 FAM157AC9JC47 383 aa9.3□□□□□ -0.92
CPNE1-214ENST00000435747 COPEO14579 308 aa9.3□□□□□ -0.92
CPNE1-214ENST00000435747 CLOCKO15516 846 aa9.3□□□□□ -0.92
CPNE1-214ENST00000435747 FADS1O60427 444 aa9.3□□□□□ -0.92
CPNE1-214ENST00000435747 ZIC3O60481 467 aa9.3□□□□□ -0.92
CPNE1-214ENST00000435747 ABCB7O75027 752 aa9.3□□□□□ -0.92
CPNE1-214ENST00000435747 CBR3O75828 277 aa9.3□□□□□ -0.92
CPNE1-214ENST00000435747 JUNP05412 331 aaKnown RBP9.3□□□□□ -0.92
CPNE1-214ENST00000435747 FGF4P08620 206 aa9.3□□□□□ -0.92
CPNE1-214ENST00000435747 USF1P22415 310 aaPredicted RBP9.3□□□□□ -0.92
CPNE1-214ENST00000435747 MPIP34949 423 aa9.3□□□□□ -0.92
CPNE1-214ENST00000435747 B3GALT5-AS1P59052 145 aa9.3□□□□□ -0.92
CPNE1-214ENST00000435747 SIRPAP78324 504 aa9.3□□□□□ -0.92
CPNE1-214ENST00000435747 C2orf80Q0P641 193 aa9.3□□□□□ -0.92
CPNE1-214ENST00000435747 PDE7AQ13946 482 aa9.3□□□□□ -0.92
CPNE1-214ENST00000435747 CR1LQ2VPA4 569 aa9.3□□□□□ -0.92
CPNE1-214ENST00000435747 RFTN2Q52LD8 501 aaPredicted RBP9.3□□□□□ -0.92
CPNE1-214ENST00000435747 ZNF385BQ569K4 471 aa9.3□□□□□ -0.92
CPNE1-214ENST00000435747 EXOSC6Q5RKV6 272 aaKnown RBP9.3□□□□□ -0.92
CPNE1-214ENST00000435747 OR2A2Q6IF42 318 aa9.3□□□□□ -0.92
CPNE1-214ENST00000435747 TREML4Q6UXN2 200 aa9.3□□□□□ -0.92
CPNE1-214ENST00000435747 YRDCQ86U90 279 aaKnown RBP9.3□□□□□ -0.92
CPNE1-214ENST00000435747 FADS6Q8N9I5 356 aa9.3□□□□□ -0.92
CPNE1-214ENST00000435747 LILRB1Q8NHL6 650 aaPredicted RBP9.3□□□□□ -0.92
CPNE1-214ENST00000435747 RAB3IL1Q8TBN0 382 aa9.3□□□□□ -0.92
CPNE1-214ENST00000435747 AENQ8WTP8 325 aaKnown RBP9.3□□□□□ -0.92
CPNE1-214ENST00000435747 ELP4Q96EB1 424 aa9.3□□□□□ -0.92
CPNE1-214ENST00000435747 APOPT1Q96IL0 206 aa9.3□□□□□ -0.92
CPNE1-214ENST00000435747 ADAD1Q96M93 576 aaKnown RBP9.3□□□□□ -0.92
CPNE1-214ENST00000435747 ADOQ96SZ5 270 aa9.3□□□□□ -0.92
CPNE1-214ENST00000435747 LMF2Q9BU23 707 aaKnown RBP9.3□□□□□ -0.92
CPNE1-214ENST00000435747 TRMOQ9BU70 441 aa9.3□□□□□ -0.92
CPNE1-214ENST00000435747 OCEL1Q9H607 264 aa9.3□□□□□ -0.92
CPNE1-214ENST00000435747 SERHLQ9NQF3 203 aa9.3□□□□□ -0.92
CPNE1-214ENST00000435747 TAS2R9Q9NYW1 312 aa9.3□□□□□ -0.92
CPNE1-214ENST00000435747 NTMQ9P121 344 aa9.3□□□□□ -0.92
CPNE1-214ENST00000435747 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 A0A0A6YYJ9 748 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 TMEM233B4DJY2 109 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 SLCO1B7G3V0H7 640 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 AZIN1O14977 448 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 LSM1O15116 133 aaKnown RBP9.29□□□□□ -0.92
CPNE1-214ENST00000435747 TRIM13O60858 407 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 REM1O75628 298 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 TGM6O95932 706 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 CHRNGP07510 517 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 ZNF708P17019 499 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 SDC1P18827 310 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 ALDH3A1P30838 453 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 SRD5A2P31213 254 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 ETV4P43268 484 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 LHX2P50458 406 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 NCBP2P52298 156 aaKnown RBP eCLIP9.29□□□□□ -0.923e-6■■□□□ 12.2
CPNE1-214ENST00000435747 CLDN15P56746 228 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 CLDN18P56856 261 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 EFR3AQ14156 821 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 EXOC3L2Q2M3D2 409 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 ERCC6LQ2NKX8 1250 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 XKR7Q5GH72 579 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 SPDYAQ5MJ70 313 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 TMEM107Q6UX40 140 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 SEZ6L2Q6UXD5 910 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 LARP4Q71RC2 724 aaKnown RBP eCLIP9.29□□□□□ -0.92
CPNE1-214ENST00000435747 PLCZ1Q86YW0 608 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 SLC44A2Q8IWA5 706 aaPredicted RBP9.29□□□□□ -0.92
CPNE1-214ENST00000435747 RIBC1Q8N443 379 aaPredicted RBP9.29□□□□□ -0.92
CPNE1-214ENST00000435747 ZNF610Q8N9Z0 462 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 SEMA6DQ8NFY4 1073 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 FAM168AQ92567 244 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 PROX1Q92786 737 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 EFHD2Q96C19 240 aaPredicted RBP9.29□□□□□ -0.92
CPNE1-214ENST00000435747 TMCO6Q96DC7 493 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 MSI2Q96DH6 328 aaKnown RBP9.29□□□□□ -0.92
CPNE1-214ENST00000435747 TRIM44Q96DX7 344 aaPredicted RBP9.29□□□□□ -0.92
CPNE1-214ENST00000435747 GIMAP5Q96F15 307 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 CCT7Q99832 543 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 TRAF4Q9BUZ4 470 aaPredicted RBP9.29□□□□□ -0.92
CPNE1-214ENST00000435747 RRAGDQ9NQL2 400 aaPredicted RBP9.29□□□□□ -0.92
CPNE1-214ENST00000435747 GIMAP4Q9NUV9 329 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 C1orf109Q9NX04 203 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 KLRF1Q9NZS2 232 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 FLRT3Q9NZU0 649 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 SLC17A7Q9P2U7 560 aa9.29□□□□□ -0.92
CPNE1-214ENST00000435747 HCRTR2O43614 444 aa9.28□□□□□ -0.92
CPNE1-214ENST00000435747 TYROBPO43914 113 aa9.28□□□□□ -0.92
CPNE1-214ENST00000435747 COQ9O75208 318 aa9.28□□□□□ -0.92
CPNE1-214ENST00000435747 IL33O95760 270 aa9.28□□□□□ -0.92
CPNE1-214ENST00000435747 IGKV1D-16P01601 117 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms