RNA–Protein interactions for RNA: ENST00000435216.1

CDCA4P4-201, Transcript of cell division cycle associated 4 pseudogene 4, humanhuman

BASIC

Gene CDCA4P4, Length 680 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P4-201ENST00000435216 SCDO00767 359 aa11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 SCAMP2O15127 329 aaKnown RBP11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 OIP5O43482 229 aa11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 PEX11AO75192 247 aa11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 HMGN2P05204 90 aaKnown RBP11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 THBDP07204 575 aa11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 INHBBP09529 407 aa11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 LAMP1P11279 417 aa11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 FCGR2AP12318 317 aa11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 HPGDP15428 266 aa11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 ZNF17P17021 662 aa11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 PSMA4P25789 261 aaKnown RBP11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 SHC1P29353 583 aa11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 ADSLP30566 484 aaPredicted RBP11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 ARRB2P32121 409 aa11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 PRIM2P49643 509 aa11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 ZNF41P51814 821 aaPredicted RBP11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 CTBP2P56545 445 aa11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 PTGR1Q14914 329 aa11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 Q5PR19 223 aa11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 RNF165Q6ZSG1 346 aa11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 HEATR5AQ86XA9 2040 aa11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 NAV3Q8IVL0 2385 aa11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 P3H2Q8IVL5 708 aa11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 BANPQ8N9N5 519 aa11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 EIF1ADQ8N9N8 165 aaKnown RBP11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 OR6Y1Q8NGX8 325 aa11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 MARK4Q96L34 752 aa11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 C3orf30Q96M34 536 aa11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 C12orf49Q9H741 205 aa11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 PPCSQ9HAB8 311 aa11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 UBQLN4Q9NRR5 601 aa11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 TMED5Q9Y3A6 229 aa11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 EMC9Q9Y3B6 208 aa11.73□□□□□ -0.53
CDCA4P4-201ENST00000435216 A0A087WZY1 265 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 SMPD2O60906 423 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 SKAP2O75563 359 aaPredicted RBP11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 SLU7O95391 586 aaKnown RBP11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 NGFRP08138 427 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 FGF4P08620 206 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 LOXP28300 417 aaPredicted RBP11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 SFTPDP35247 375 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 HPCAL1P37235 193 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 ASMTP46597 345 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 SERPINB4P48594 390 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 PCYT1AP49585 367 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 RAC1P63000 192 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 POU6F2P78424 691 aaPredicted RBP11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 ZNF117Q03924 483 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 LTBQ06643 244 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 TP53BP2Q13625 1128 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 ACKR1Q16570 336 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 EXOSC6Q5RKV6 272 aaKnown RBP11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 CPTPQ5TA50 214 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 HBMQ6B0K9 141 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 CBLN3Q6UW01 205 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 LRIG3Q6UXM1 1119 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 R3HCC1LQ7Z5L2 792 aaKnown RBP11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 BIVMQ86UB2 503 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 TRABD2AQ86V40 505 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 CIARTQ8N365 385 aaPredicted RBP11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 KRTCAP2Q8N6L1 136 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 OR6K3Q8NGY3 331 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 OR2V1Q8NHB1 315 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 B4GALNT2Q8NHY0 566 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 PHOSPHO1Q8TCT1 267 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 ROBO4Q8WZ75 1007 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 ZBTB8AQ96BR9 441 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 MTERF3Q96E29 417 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 PERPQ96FX8 193 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 GMPPAQ96IJ6 420 aaPredicted RBP11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 CCL19Q99731 98 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 BTBD2Q9BX70 525 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 CXorf36Q9H7Y0 433 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 ZNF395Q9H8N7 513 aaPredicted RBP11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 STOML1Q9UBI4 398 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 ATP6V1HQ9UI12 483 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 MCTS1Q9ULC4 181 aaKnown RBP11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 KCNE3Q9Y6H6 103 aa11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 RAI1Q7Z5J4 1906 aaPredicted RBP11.72□□□□□ -0.53
CDCA4P4-201ENST00000435216 TMEM114B3SHH9 223 aa11.71□□□□□ -0.53
CDCA4P4-201ENST00000435216 NPHS1O60500 1241 aa11.71□□□□□ -0.53
CDCA4P4-201ENST00000435216 SS18L1O75177 396 aaPredicted RBP11.71□□□□□ -0.53
CDCA4P4-201ENST00000435216 SYNGR4O95473 234 aa11.71□□□□□ -0.53
CDCA4P4-201ENST00000435216 NTN1O95631 604 aa11.71□□□□□ -0.53
CDCA4P4-201ENST00000435216 NUDT14O95848 222 aa11.71□□□□□ -0.53
CDCA4P4-201ENST00000435216 C6orf47O95873 294 aa11.71□□□□□ -0.53
CDCA4P4-201ENST00000435216 LINGO3P0C6S8 592 aa11.71□□□□□ -0.53
CDCA4P4-201ENST00000435216 CREB1P16220 341 aa11.71□□□□□ -0.53
CDCA4P4-201ENST00000435216 ME2P23368 584 aa11.71□□□□□ -0.53
CDCA4P4-201ENST00000435216 CCT3P49368 545 aaKnown RBP11.71□□□□□ -0.53
CDCA4P4-201ENST00000435216 OCRLQ01968 901 aa11.71□□□□□ -0.53
CDCA4P4-201ENST00000435216 FOXF1Q12946 379 aa11.71□□□□□ -0.53
CDCA4P4-201ENST00000435216 FGFBP1Q14512 234 aa11.71□□□□□ -0.53
CDCA4P4-201ENST00000435216 NDUFAF6Q330K2 333 aa11.71□□□□□ -0.53
CDCA4P4-201ENST00000435216 XKR7Q5GH72 579 aa11.71□□□□□ -0.53
CDCA4P4-201ENST00000435216 SHEQ5VZ18 495 aa11.71□□□□□ -0.53
CDCA4P4-201ENST00000435216 ALKBH2Q6NS38 261 aa11.71□□□□□ -0.53
CDCA4P4-201ENST00000435216 CDC73Q6P1J9 531 aa11.71□□□□□ -0.53
CDCA4P4-201ENST00000435216 ZCCHC12Q6PEW1 402 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms