RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 MAD2L1BPQ15013 274 aaPredicted RBP6.88□□□□□ -1.31
GARNL3-205ENST00000435213 KIAA0040Q15053 153 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 WSCD1Q658N2 575 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 ZNF385CQ66K41 422 aaPredicted RBP6.88□□□□□ -1.31
GARNL3-205ENST00000435213 ATG9BQ674R7 924 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 PTCHD4Q6ZW05 846 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 LINGO2Q7L985 606 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 APOBEC3FQ8IUX4 373 aaKnown RBP6.88□□□□□ -1.31
GARNL3-205ENST00000435213 NPAS3Q8IXF0 933 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 BEST4Q8NFU0 473 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 OR2G2Q8NGZ5 317 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 C9orf43Q8TAL5 461 aaPredicted RBP6.88□□□□□ -1.31
GARNL3-205ENST00000435213 SMARCD1Q96GM5 515 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 WFIKKN1Q96NZ8 548 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 ACBD6Q9BR61 282 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 JAM3Q9BX67 310 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 POLDIP3Q9BY77 421 aaKnown RBP6.88□□□□□ -1.31
GARNL3-205ENST00000435213 ACTL8Q9H568 366 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 CALML5Q9NZT1 146 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 ZNF629Q9UEG4 869 aaPredicted RBP6.88□□□□□ -1.31
GARNL3-205ENST00000435213 CARHSP1Q9Y2V2 147 aaKnown RBP6.88□□□□□ -1.31
GARNL3-205ENST00000435213 PKP3Q9Y446 797 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 PLEKHM1Q9Y4G2 1056 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 SERTM2A0A1B0GWG4 89 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 TCRBV21S2A2A0A5A6 115 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 TRAPPC13A5PLN9 417 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 TBC1D3FA6NER0 549 aaPredicted RBP6.88□□□□□ -1.31
GARNL3-205ENST00000435213 AQP8O94778 261 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 EGFP01133 1207 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 MMP2P08253 660 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 SULT1A3P0DMM9 295 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 SULT1A4P0DMN0 295 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 TMIGD3P0DMS9 266 aaPredicted RBP6.88□□□□□ -1.31
GARNL3-205ENST00000435213 GABRA1P14867 456 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 GIFP27352 417 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 PRDX3P30048 256 aaKnown RBP6.88□□□□□ -1.31
GARNL3-205ENST00000435213 CD200P41217 278 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 CDX1P47902 265 aaPredicted RBP6.88□□□□□ -1.31
GARNL3-205ENST00000435213 STC1P52823 247 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 DHODHQ02127 395 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 GAMTQ14353 236 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 HLXQ14774 488 aaPredicted RBP6.88□□□□□ -1.31
GARNL3-205ENST00000435213 UBXN2BQ14CS0 331 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 CCDC85BQ15834 202 aaPredicted RBP6.88□□□□□ -1.31
GARNL3-205ENST00000435213 SCGB2B2Q4G0G5 96 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 SIRPB2Q5JXA9 342 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 DCAF10Q5QP82 559 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 CPZQ66K79 652 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 ULK3Q6PHR2 472 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 TMEM86AQ8N2M4 240 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 NKAPQ8N5F7 415 aaKnown RBP6.88□□□□□ -1.31
GARNL3-205ENST00000435213 DNAJC5GQ8N7S2 189 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 ZNF614Q8N883 585 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 POGLUT1Q8NBL1 392 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 ZNF784Q8NCA9 323 aaPredicted RBP6.88□□□□□ -1.31
GARNL3-205ENST00000435213 CCDC54Q8NEL0 328 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 BBS1Q8NFJ9 593 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 OR10A6Q8NH74 314 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 TERB2Q8NHR7 220 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 PPTC7Q8NI37 304 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 MR1Q95460 341 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 PITX2Q99697 317 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 SIK2Q9H0K1 926 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 HDHD2Q9H0R4 259 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 TAS2R13Q9NYV9 303 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 DNAJB11Q9UBS4 358 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 GDF2Q9UK05 429 aaPredicted RBP6.88□□□□□ -1.31
GARNL3-205ENST00000435213 TOXO94900 526 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 IFNA6P05013 189 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 BMP7P18075 431 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 POU3F2P20265 443 aaPredicted RBP6.88□□□□□ -1.31
GARNL3-205ENST00000435213 PRKACGP22612 351 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 ADH6P28332 368 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 CDH11P55287 796 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 LSM11P83369 360 aaKnown RBP eCLIP6.88□□□□□ -1.31
GARNL3-205ENST00000435213 TRA2AQ13595 282 aaKnown RBP eCLIP6.88□□□□□ -1.31
GARNL3-205ENST00000435213 MBTPS1Q14703 1052 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 TSNQ15631 228 aaKnown RBP6.88□□□□□ -1.31
GARNL3-205ENST00000435213 SPDYE7PQ495Y7 208 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 PRSS36Q5K4E3 855 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 CASP12Q6UXS9 341 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 Q6ZSR9 355 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 DET1Q7L5Y6 550 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 ZNF367Q7RTV3 350 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 GPC2Q8N158 579 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 CHST14Q8NCH0 376 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 ATP6V1C2Q8NEY4 427 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 NUDT11Q96G61 164 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 ZNF354BQ96LW1 612 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 AMDHD1Q96NU7 426 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 MGME1Q9BQP7 344 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 THUMPD3Q9BV44 507 aaKnown RBP6.88□□□□□ -1.31
GARNL3-205ENST00000435213 CHST5Q9GZS9 411 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 SPRTNQ9H040 489 aaPredicted RBP6.88□□□□□ -1.31
GARNL3-205ENST00000435213 GOLGA2P5Q9HBQ8 144 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 CAPN10Q9HC96 672 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 CSNK1G1Q9HCP0 422 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 SNTG1Q9NSN8 517 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 TMEM248Q9NWD8 314 aa6.88□□□□□ -1.31
GARNL3-205ENST00000435213 MIOSQ9NXC5 875 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms