RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 ISM1B1AKI9 464 aa11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 LRRTM2O43300 516 aa11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 HNRNPA1P09651 372 aaKnown RBP eCLIP11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 POU3F2P20265 443 aaPredicted RBP11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 PTAFRP25105 342 aa11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 MAT2AP31153 395 aaKnown RBP11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 MAP4K2Q12851 820 aa11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 ASAH1Q13510 395 aa11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 TIGD3Q6B0B8 471 aa11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 VASNQ6EMK4 673 aa11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 ZNF425Q6IV72 752 aa11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 RBMS3Q6XE24 437 aaKnown RBP11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 ZNF793Q6ZN11 406 aa11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 SHFQ7M4L6 423 aa11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 TMEM145Q8NBT3 493 aa11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 APOBEC4Q8WW27 367 aaKnown RBP11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 BADQ92934 168 aa11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 COL26A1Q96A83 441 aa11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 CRISPLD2Q9H0B8 497 aa11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 ZNF275Q9NSD4 429 aaPredicted RBP11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 A0A1W2PPV9 198 aa11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 HMGN2P05204 90 aaKnown RBP11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 TPOP07202 933 aa11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 MMP11P24347 488 aa11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 C1DQ13901 141 aaKnown RBP11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 C9orf152Q5JTZ5 239 aa11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 ACSM5Q6NUN0 579 aa11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 AMDHD1Q96NU7 426 aa11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 CMSS1Q9BQ75 279 aaKnown RBP11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 WDR26Q9H7D7 661 aa11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 ASH2LQ9UBL3 628 aa11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 CTSFQ9UBX1 484 aa11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 SLC13A4Q9UKG4 626 aa11.44□□□□□ -0.58
SEMA3F-206ENST00000434342 DENND4CQ5VZ89 1909 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 LOC105369274A0A096LPK9 316 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 A0A1W2PP55 124 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 A0A1W2PQL4 384 aaPredicted RBP11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 AKAP8O43823 692 aaKnown RBP11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 SIX6O95475 246 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 CH25HO95992 272 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 HBQ1P09105 142 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 HK1P19367 917 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 NTSP30990 170 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 CAV3P56539 151 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 SLC9A5Q14940 896 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 TMEM52BQ4KMG9 183 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 LCN1P1Q5VSP4 162 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 TMEM107Q6UX40 140 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 RRM2BQ7LG56 351 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 OR4N4Q8N0Y3 316 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 RAB42Q8N4Z0 105 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 TBC1D19Q8N5T2 526 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 ZNF655Q8N720 491 aaPredicted RBP11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 BEST4Q8NFU0 473 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 OTULINQ96BN8 352 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 ZG16BQ96DA0 208 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 GPA33Q99795 319 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 PELI2Q9HAT8 420 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 A4GNTQ9UNA3 340 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 ATG4BQ9Y4P1 393 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 MAB21L2Q9Y586 359 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 KCNE3Q9Y6H6 103 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 A3GALT2U3KPV4 340 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 TCF20Q9UGU0 1960 aaKnown RBP11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 TRBV23OR9-2A0A075B6M9 112 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 KIAA0355O15063 1070 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 EGFP01133 1207 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 SCG5P05408 212 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 CXCL3P19876 107 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 GIPRP48546 466 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 SMIM11AP58511 58 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 REEP5Q00765 189 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 ATAT1Q5SQI0 421 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 OR2G6Q5TZ20 316 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 SLC6A19Q695T7 634 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 PSRC1Q6PGN9 363 aaPredicted RBP11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 FGF13Q92913 245 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 SLC6A18Q96N87 628 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 EGLN3Q9H6Z9 239 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 SERGEFQ9UGK8 458 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 IL20RAQ9UHF4 553 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 KLF2Q9Y5W3 355 aaPredicted RBP11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 GNB5O14775 395 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 CDRT1O95170 752 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 SLC2A2P11168 524 aaPredicted RBP11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 PRDX1Q06830 199 aaKnown RBP11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 SERTAD2Q14140 314 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 ARHGAP19Q14CB8 494 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 LGALSLQ3ZCW2 172 aaPredicted RBP11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 C18orf63Q68DL7 685 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 ALKAL2Q6UX46 152 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 ASB18Q6ZVZ8 466 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 HDDC3Q8N4P3 179 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 DOK4Q8TEW6 326 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 C1GALT1C1Q96EU7 318 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 COX14Q96I36 57 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 FAIM2Q9BWQ8 316 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 PCBD2Q9H0N5 130 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 SLC25A19Q9HC21 320 aa11.43□□□□□ -0.58
SEMA3F-206ENST00000434342 COMMD3Q9UBI1 195 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms