RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 PLAURQ03405 335 aa24.25■■□□□ 1.47
TMEM248-205ENST00000433271 CD226Q15762 336 aa24.25■■□□□ 1.47
TMEM248-205ENST00000433271 AGAP7PQ5VUJ5 663 aa24.25■■□□□ 1.47
TMEM248-205ENST00000433271 TSEN54Q7Z6J9 526 aaKnown RBP24.25■■□□□ 1.47
TMEM248-205ENST00000433271 MARCH3Q86UD3 253 aa24.25■■□□□ 1.47
TMEM248-205ENST00000433271 LACC1Q8IV20 430 aa24.25■■□□□ 1.47
TMEM248-205ENST00000433271 APLFQ8IW19 511 aaPredicted RBP24.25■■□□□ 1.47
TMEM248-205ENST00000433271 OR6T1Q8NGN1 323 aa24.25■■□□□ 1.47
TMEM248-205ENST00000433271 VANGL1Q8TAA9 524 aaPredicted RBP24.25■■□□□ 1.47
TMEM248-205ENST00000433271 PHOSPHO1Q8TCT1 267 aa24.25■■□□□ 1.47
TMEM248-205ENST00000433271 CNOT9Q92600 299 aaKnown RBP24.25■■□□□ 1.47
TMEM248-205ENST00000433271 AGAP4Q96P64 663 aa24.25■■□□□ 1.47
TMEM248-205ENST00000433271 DNAJB12Q9NXW2 375 aaKnown RBP24.25■■□□□ 1.47
TMEM248-205ENST00000433271 CHCHD2Q9Y6H1 151 aaPredicted RBP24.25■■□□□ 1.47
TMEM248-205ENST00000433271 URB1O60287 2271 aaKnown RBP24.25■■□□□ 1.47
TMEM248-205ENST00000433271 A6NL46 340 aa24.24■■□□□ 1.47
TMEM248-205ENST00000433271 CDK2AP1O14519 115 aa24.24■■□□□ 1.47
TMEM248-205ENST00000433271 BCAS1O75363 584 aaPredicted RBP24.24■■□□□ 1.47
TMEM248-205ENST00000433271 FASP25445 335 aa24.24■■□□□ 1.47
TMEM248-205ENST00000433271 ST13P50502 369 aaKnown RBP24.24■■□□□ 1.47
TMEM248-205ENST00000433271 HLCSP50747 726 aa24.24■■□□□ 1.47
TMEM248-205ENST00000433271 RPP38P78345 283 aaKnown RBP24.24■■□□□ 1.47
TMEM248-205ENST00000433271 ZNF468Q5VIY5 522 aaPredicted RBP24.24■■□□□ 1.47
TMEM248-205ENST00000433271 ERMP1Q7Z2K6 904 aa24.24■■□□□ 1.47
TMEM248-205ENST00000433271 RBM45Q8IUH3 476 aaKnown RBP24.24■■□□□ 1.47
TMEM248-205ENST00000433271 PQLC1Q8N2U9 271 aa24.24■■□□□ 1.47
TMEM248-205ENST00000433271 LRTOMTQ8WZ04 291 aa24.24■■□□□ 1.47
TMEM248-205ENST00000433271 DCBLD2Q96PD2 775 aa24.24■■□□□ 1.47
TMEM248-205ENST00000433271 ZNF300Q96RE9 604 aaPredicted RBP24.24■■□□□ 1.47
TMEM248-205ENST00000433271 RTN4RQ9BZR6 473 aa24.24■■□□□ 1.47
TMEM248-205ENST00000433271 GPR83Q9NYM4 423 aa24.24■■□□□ 1.47
TMEM248-205ENST00000433271 NKX1-2Q9UD57 310 aaPredicted RBP24.24■■□□□ 1.47
TMEM248-205ENST00000433271 KCNMB2Q9Y691 235 aa24.24■■□□□ 1.47
TMEM248-205ENST00000433271 ENPP4Q9Y6X5 453 aa24.24■■□□□ 1.47
TMEM248-205ENST00000433271 FRS3O43559 492 aa24.24■■□□□ 1.47
TMEM248-205ENST00000433271 NDUFB5O43674 189 aa24.24■■□□□ 1.47
TMEM248-205ENST00000433271 CYB561P49447 251 aa24.24■■□□□ 1.47
TMEM248-205ENST00000433271 RGS8P57771 180 aaPredicted RBP24.24■■□□□ 1.47
TMEM248-205ENST00000433271 TLE3Q04726 772 aa24.24■■□□□ 1.47
TMEM248-205ENST00000433271 FBXW10Q5XX13 1052 aa24.24■■□□□ 1.47
TMEM248-205ENST00000433271 TMEM81Q6P7N7 255 aa24.24■■□□□ 1.47
TMEM248-205ENST00000433271 ISLR2Q6UXK2 745 aa24.24■■□□□ 1.47
TMEM248-205ENST00000433271 LILRA2Q8N149 483 aa24.24■■□□□ 1.47
TMEM248-205ENST00000433271 GATSQ8NAP1 163 aa24.24■■□□□ 1.47
TMEM248-205ENST00000433271 FAM71CQ8NEG0 241 aa24.24■■□□□ 1.47
TMEM248-205ENST00000433271 SH2D2AQ9NP31 389 aa24.24■■□□□ 1.47
TMEM248-205ENST00000433271 AGPAT4Q9NRZ5 378 aa24.24■■□□□ 1.47
TMEM248-205ENST00000433271 C6orf203Q9P0P8 240 aaPredicted RBP24.24■■□□□ 1.47
TMEM248-205ENST00000433271 GTPBP1O00178 669 aaKnown RBP24.23■■□□□ 1.47
TMEM248-205ENST00000433271 ANGPTL1O95841 491 aa24.23■■□□□ 1.47
TMEM248-205ENST00000433271 UBTFL6P0CB48 400 aaPredicted RBP24.23■■□□□ 1.47
TMEM248-205ENST00000433271 UBL4AP11441 157 aa24.23■■□□□ 1.47
TMEM248-205ENST00000433271 CCL11P51671 97 aa24.23■■□□□ 1.47
TMEM248-205ENST00000433271 BROXQ5VW32 411 aa24.23■■□□□ 1.47
TMEM248-205ENST00000433271 RTL4Q6ZR62 310 aa24.23■■□□□ 1.47
TMEM248-205ENST00000433271 MISPQ8IVT2 679 aa24.23■■□□□ 1.47
TMEM248-205ENST00000433271 PAQR8Q8TEZ7 354 aa24.23■■□□□ 1.47
TMEM248-205ENST00000433271 ZNF347Q96SE7 839 aa24.23■■□□□ 1.47
TMEM248-205ENST00000433271 PKP2Q99959 881 aa24.23■■□□□ 1.47
TMEM248-205ENST00000433271 METTL7AQ9H8H3 244 aa24.23■■□□□ 1.47
TMEM248-205ENST00000433271 FAM32AQ9Y421 112 aaKnown RBP24.23■■□□□ 1.47
TMEM248-205ENST00000433271 ADAM10O14672 748 aa24.22■■□□□ 1.47
TMEM248-205ENST00000433271 CLOCKO15516 846 aa24.22■■□□□ 1.47
TMEM248-205ENST00000433271 ZNF264O43296 627 aa24.22■■□□□ 1.47
TMEM248-205ENST00000433271 CST1P01037 141 aa24.22■■□□□ 1.47
TMEM248-205ENST00000433271 RHCEP18577 417 aa24.22■■□□□ 1.47
TMEM248-205ENST00000433271 SNTA1Q13424 505 aa24.22■■□□□ 1.47
TMEM248-205ENST00000433271 NPTX1Q15818 432 aa24.22■■□□□ 1.47
TMEM248-205ENST00000433271 ATP6AP1Q15904 470 aa24.22■■□□□ 1.47
TMEM248-205ENST00000433271 SLC22A10Q63ZE4 541 aa24.22■■□□□ 1.47
TMEM248-205ENST00000433271 ZNF440Q8IYI8 595 aa24.22■■□□□ 1.47
TMEM248-205ENST00000433271 CYP4Z2PQ8N1L4 340 aa24.22■■□□□ 1.47
TMEM248-205ENST00000433271 EXOSC3Q9NQT5 275 aaKnown RBP24.22■■□□□ 1.47
TMEM248-205ENST00000433271 KLRF1Q9NZS2 232 aa24.22■■□□□ 1.47
TMEM248-205ENST00000433271 SCO2O43819 266 aa24.21■■□□□ 1.47
TMEM248-205ENST00000433271 DEAF1O75398 565 aaPredicted RBP24.21■■□□□ 1.47
TMEM248-205ENST00000433271 LDLRP01130 860 aa24.21■■□□□ 1.47
TMEM248-205ENST00000433271 GKN3PP0CG01 181 aa24.21■■□□□ 1.47
TMEM248-205ENST00000433271 CASP3P42574 277 aa24.21■■□□□ 1.47
TMEM248-205ENST00000433271 ZNF136P52737 540 aa24.21■■□□□ 1.47
TMEM248-205ENST00000433271 GAS1P54826 345 aa24.21■■□□□ 1.47
TMEM248-205ENST00000433271 RAPSNQ13702 412 aa24.21■■□□□ 1.47
TMEM248-205ENST00000433271 DEF8Q6ZN54 512 aa24.21■■□□□ 1.47
TMEM248-205ENST00000433271 LRRC69Q6ZNQ3 347 aa24.21■■□□□ 1.47
TMEM248-205ENST00000433271 LINC00696Q6ZRV3 163 aa24.21■■□□□ 1.47
TMEM248-205ENST00000433271 ZNF550Q7Z398 422 aa24.21■■□□□ 1.47
TMEM248-205ENST00000433271 UTP23Q9BRU9 249 aaKnown RBP24.21■■□□□ 1.47
TMEM248-205ENST00000433271 ZNF552Q9H707 407 aaPredicted RBP24.21■■□□□ 1.47
TMEM248-205ENST00000433271 ANKRD10Q9NXR5 420 aa24.21■■□□□ 1.47
TMEM248-205ENST00000433271 CNIH4Q9P003 139 aa24.21■■□□□ 1.47
TMEM248-205ENST00000433271 DNAJB9Q9UBS3 223 aa24.21■■□□□ 1.47
TMEM248-205ENST00000433271 RAXQ9Y2V3 346 aa24.21■■□□□ 1.47
TMEM248-205ENST00000433271 DMXL2Q8TDJ6 3036 aa24.21■■□□□ 1.47
TMEM248-205ENST00000433271 DPM1O60762 260 aa24.21■■□□□ 1.47
TMEM248-205ENST00000433271 SEMA7AO75326 666 aa24.21■■□□□ 1.47
TMEM248-205ENST00000433271 CASRP41180 1078 aa24.21■■□□□ 1.47
TMEM248-205ENST00000433271 NDUFAF6Q330K2 333 aa24.21■■□□□ 1.47
TMEM248-205ENST00000433271 OR2T5Q6IEZ7 315 aa24.21■■□□□ 1.47
TMEM248-205ENST00000433271 HMBOX1Q6NT76 420 aa24.21■■□□□ 1.47
TMEM248-205ENST00000433271 AMIGO2Q86SJ2 522 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms