RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 IL32P24001 234 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 CD6P30203 668 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 WDR5P61964 334 aaKnown RBP14.49□□□□□ -0.09
PTPRF-206ENST00000429895 TDGQ13569 410 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 CCNJQ5T5M9 372 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 LCTLQ6UWM7 567 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 PARS2Q7L3T8 475 aaKnown RBP14.49□□□□□ -0.09
PTPRF-206ENST00000429895 CD200R1Q8TD46 325 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 MYLIPQ8WY64 445 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 PIGCQ92535 297 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 TBC1D20Q96BZ9 403 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 CD300LBA8K4G0 201 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 SERPINA7P05543 415 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 SERPINA2P20848 420 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 CD79BP40259 229 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 ETV4P43268 484 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 PNCKQ6P2M8 343 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 KCTD20Q7Z5Y7 419 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 SGPP2Q8IWX5 399 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 METTL25Q8N6Q8 603 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 FGF13Q92913 245 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 ANTXRLA6NF34 631 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 MSR1P21757 451 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 PRSS3P35030 304 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 RBPJQ06330 500 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 ZNF845Q96IR2 970 aaPredicted RBP14.49□□□□□ -0.09
PTPRF-206ENST00000429895 PFDN5Q99471 154 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 PINK1Q9BXM7 581 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 IDUAP35475 653 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 ALDH3B1P43353 468 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 TNFRSF4P43489 277 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 BMXP51813 675 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 GLO1Q04760 184 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 RELL1Q8IUW5 271 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 TANKQ92844 425 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 APMAPQ9HDC9 416 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 F10P00742 488 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 OR1D4P47884 311 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 FOXA1P55317 472 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 STEAP4Q687X5 459 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 ZNF704Q6ZNC4 412 aaPredicted RBP14.49□□□□□ -0.09
PTPRF-206ENST00000429895 TEX19Q8NA77 164 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 FRZBQ92765 325 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 FKRPQ9H9S5 495 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 RAB9BQ9NP90 201 aa14.49□□□□□ -0.09
PTPRF-206ENST00000429895 A0A087WUU8 490 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 A0A1W2PQL4 384 aaPredicted RBP14.48□□□□□ -0.09
PTPRF-206ENST00000429895 DVL2O14641 736 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 MBTPS1Q14703 1052 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 PTPRRQ15256 657 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 ACOT13Q9NPJ3 140 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 EDARQ9UNE0 448 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 ALDH3B2P48448 385 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 MAT1AQ00266 395 aaKnown RBP14.48□□□□□ -0.09
PTPRF-206ENST00000429895 TMEM31Q5JXX7 168 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 CCBE1Q6UXH8 406 aaPredicted RBP14.48□□□□□ -0.09
PTPRF-206ENST00000429895 DPPA4Q7L190 304 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 CASD1Q96PB1 797 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 TAS2R8Q9NYW2 309 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 CPNE7Q9UBL6 633 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 M0QZQ0 153 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 ELP2Q6IA86 826 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 SCD5Q86SK9 330 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 TCEAL8Q8IYN2 117 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 SYNPRQ8TBG9 265 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 DUSP23Q9BVJ7 150 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 INIPQ9NRY2 104 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 PRSS21Q9Y6M0 314 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 C10orf71Q711Q0 1435 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 UBFD1O14562 309 aaKnown RBP14.48□□□□□ -0.09
PTPRF-206ENST00000429895 ONECUT3O60422 494 aaPredicted RBP14.48□□□□□ -0.09
PTPRF-206ENST00000429895 SPDEFO95238 335 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 KIR2DS3Q14952 304 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 ZNF423Q2M1K9 1284 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 LCN10Q6JVE6 187 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 KIAA1211LQ6NV74 962 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 GTPBP8Q8N3Z3 284 aaPredicted RBP14.48□□□□□ -0.09
PTPRF-206ENST00000429895 ASCC1Q8N9N2 400 aaKnown RBP14.48□□□□□ -0.09
PTPRF-206ENST00000429895 CHDHQ8NE62 594 aaPredicted RBP14.48□□□□□ -0.09
PTPRF-206ENST00000429895 C7orf43Q8WVR3 580 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 KDM4EB2RXH2 506 aaPredicted RBP14.48□□□□□ -0.09
PTPRF-206ENST00000429895 TSPAN15O95858 294 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 VASPP50552 380 aaPredicted RBP14.48□□□□□ -0.09
PTPRF-206ENST00000429895 PPP1R3BQ86XI6 285 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 MALSU1Q96EH3 234 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 TSPAN10Q9H1Z9 355 aaPredicted RBP14.48□□□□□ -0.09
PTPRF-206ENST00000429895 RPH3ALQ9UNE2 315 aa14.48□□□□□ -0.09
PTPRF-206ENST00000429895 ZNF254O75437 659 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 GLSO94925 669 aaPredicted RBP14.47□□□□□ -0.09
PTPRF-206ENST00000429895 UGT2B7P16662 529 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 BDKRB2P30411 391 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 WNT7BP56706 349 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 RPP30P78346 268 aaKnown RBP14.47□□□□□ -0.09
PTPRF-206ENST00000429895 CNN3Q15417 329 aaKnown RBP14.47□□□□□ -0.09
PTPRF-206ENST00000429895 SLC22A6Q4U2R8 563 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 PCDHGA1Q9Y5H4 931 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 AP1G1O43747 822 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 STK17BO94768 372 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 SELENOWP63302 87 aa14.47□□□□□ -0.09
PTPRF-206ENST00000429895 PAGE3Q5JUK9 113 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms