RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 C16orf62Q7Z3J2 963 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 BCDIN3DQ7Z5W3 292 aaKnown RBP8.11□□□□□ -1.11
GABPB1-205ENST00000429662 TPRA1Q86W33 373 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 C12orf40Q86WS4 652 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 MARCH9Q86YJ5 346 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 GATAD2AQ86YP4 633 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 Q8N402 240 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 HDDC3Q8N4P3 179 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 CAMKK1Q8N5S9 505 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 ARIH2OSQ8N7S6 290 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 LINC01555Q8NAE3 123 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 TP53I13Q8NBR0 393 aaPredicted RBP8.11□□□□□ -1.11
GABPB1-205ENST00000429662 OR2T33Q8NG76 320 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 OR2A1Q8NGT9 310 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 OR52P1PQ8NH57 321 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 BRIX1Q8TDN6 353 aaKnown RBP8.11□□□□□ -1.11
GABPB1-205ENST00000429662 ADAMTS15Q8TE58 950 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 DNAJA4Q8WW22 397 aaPredicted RBP8.11□□□□□ -1.11
GABPB1-205ENST00000429662 TMEM203Q969S6 136 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 ELP4Q96EB1 424 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 INSM2Q96T92 566 aaPredicted RBP8.11□□□□□ -1.11
GABPB1-205ENST00000429662 GPA33Q99795 319 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 ATF6BQ99941 703 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 SLX1AQ9BQ83 275 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 TMEM43Q9BTV4 400 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 C1QTNF7Q9BXJ2 289 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.11□□□□□ -1.113e-8■□□□□ 8.9
GABPB1-205ENST00000429662 SLC38A1Q9H2H9 487 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 EGLN3Q9H6Z9 239 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 WDR26Q9H7D7 661 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 FOLH1BQ9HBA9 442 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 RPRD1BQ9NQG5 326 aaKnown RBP8.11□□□□□ -1.11
GABPB1-205ENST00000429662 C5AR2Q9P296 337 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 THAP10Q9P2Z0 257 aaPredicted RBP8.11□□□□□ -1.11
GABPB1-205ENST00000429662 RABL2AQ9UBK7 228 aaPredicted RBP8.11□□□□□ -1.11
GABPB1-205ENST00000429662 TNFRSF10DQ9UBN6 386 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 RABL2BQ9UNT1 228 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 COLEC10Q9Y6Z7 277 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 NUP214P35658 2090 aaPredicted RBP8.11□□□□□ -1.11
GABPB1-205ENST00000429662 ZNF462Q96JM2 2506 aa8.11□□□□□ -1.11
GABPB1-205ENST00000429662 FAM240BA0A1B0GVZ2 78 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 A0A1W2PR48 441 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 IGLON5A6NGN9 336 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 A8MU76 341 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 GABRPO00591 440 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 PLA2G10O15496 165 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 PRICKLE3O43900 615 aaPredicted RBP8.1□□□□□ -1.11
GABPB1-205ENST00000429662 FMO6PO60774 539 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 AIFM1O95831 613 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 AK1P00568 194 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 SPINK2P20155 84 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 PAICSP22234 425 aaKnown RBP8.1□□□□□ -1.11
GABPB1-205ENST00000429662 PSMB5P28074 263 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 RCVRNP35243 200 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 ATP6V1E1P36543 226 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 TALDO1P37837 337 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 BCL6P41182 706 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 KIR2DL3P43628 341 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 METAP1P53582 386 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 NTHL1P78549 312 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 CHRNEQ04844 493 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 FUT5Q11128 374 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 IL18Q14116 193 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 FLYWCH1Q4VC44 716 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 HSD17B12Q53GQ0 312 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 YIF1BQ5BJH7 314 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 C1QTNF12Q5T7M4 302 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 OR2G6Q5TZ20 316 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 SDE2Q6IQ49 451 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 ZNF322Q6U7Q0 402 aaPredicted RBP8.1□□□□□ -1.11
GABPB1-205ENST00000429662 PAMR1Q6UXH9 720 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 ZNF620Q6ZNG0 422 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 WDR53Q7Z5U6 358 aaPredicted RBP8.1□□□□□ -1.11
GABPB1-205ENST00000429662 CDH24Q86UP0 819 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 COMTD1Q86VU5 262 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 RANBP3LQ86VV4 465 aaPredicted RBP8.1□□□□□ -1.11
GABPB1-205ENST00000429662 GPALPP1Q8IXQ4 340 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 CCDC116Q8IYX3 515 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 ATP6V1C2Q8NEY4 427 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 OR52L1Q8NGH7 329 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 OR8D4Q8NGM9 314 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 NEIL3Q8TAT5 605 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 ZFAND1Q8TCF1 268 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 GAL3ST3Q96A11 431 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 CREB3L1Q96BA8 519 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 CNRIP1Q96F85 164 aaPredicted RBP8.1□□□□□ -1.11
GABPB1-205ENST00000429662 SLC41A3Q96GZ6 507 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 RNF170Q96K19 258 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 MS4A4EQ96PG1 132 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 MCHR1Q99705 422 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 KCNJ15Q99712 375 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 WFDC6Q9BQY6 131 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 TMEM246Q9BRR3 403 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 MARVELD1Q9BSK0 173 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 C1QTNF2Q9BXJ5 285 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 PLA2G12AQ9BZM1 189 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 MMP28Q9H239 520 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 PRSS16Q9NQE7 514 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 BABAM2Q9NXR7 383 aa8.1□□□□□ -1.11
GABPB1-205ENST00000429662 PTGFRNQ9P2B2 879 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms