RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 OR2B2Q9GZK3 357 aa13.62□□□□□ -0.23
GARNL3-204ENST00000429629 LAT2Q9GZY6 243 aa13.62□□□□□ -0.23
GARNL3-204ENST00000429629 EXOSC3Q9NQT5 275 aaKnown RBP13.62□□□□□ -0.23
GARNL3-204ENST00000429629 NDE1Q9NXR1 346 aa13.62□□□□□ -0.23
GARNL3-204ENST00000429629 SEC14L3Q9UDX4 400 aa13.62□□□□□ -0.23
GARNL3-204ENST00000429629 NPIPA1Q9UND3 350 aa13.62□□□□□ -0.23
GARNL3-204ENST00000429629 PRRC2CQ9Y520 2896 aaKnown RBP13.61□□□□□ -0.23
GARNL3-204ENST00000429629 C5orf58C9J3I9 102 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 GNB5O14775 395 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 SCO2O43819 266 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 NUDT7P0C024 238 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 NID1P14543 1247 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 MAGEA5P43359 124 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 MTPNP58546 118 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 KCNJ10P78508 379 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 MAPK14Q16539 360 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 SPATS1Q496A3 300 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 NHSL2Q5HYW2 709 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 COLEC12Q5KU26 742 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 PDZK1Q5T2W1 519 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 INTS11Q5TA45 600 aaKnown RBP13.61□□□□□ -0.23
GARNL3-204ENST00000429629 ERICH5Q6P6B1 374 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 TRILQ7L0X0 811 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 GALNT10Q86SR1 603 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 KRT73Q86Y46 540 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 PTOV1Q86YD1 416 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 GRAMD2AQ8IUY3 354 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 SLC15A3Q8IY34 581 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 C10orf111Q8N326 155 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 FAM71CQ8NEG0 241 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 BHLHE22Q8NFJ8 381 aaPredicted RBP13.61□□□□□ -0.23
GARNL3-204ENST00000429629 OR4K17Q8NGC6 315 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 PHOSPHO1Q8TCT1 267 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 ARSGQ96EG1 525 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 REXO5Q96IC2 774 aaKnown RBP13.61□□□□□ -0.23
GARNL3-204ENST00000429629 NSL1Q96IY1 281 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 JSRP1Q96MG2 331 aaPredicted RBP13.61□□□□□ -0.23
GARNL3-204ENST00000429629 ZNF583Q96ND8 569 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 SPATA5L1Q9BVQ7 753 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 ARMC7Q9H6L4 198 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 RUBCNLQ9H714 662 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 EVA1AQ9H8M9 152 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 ZNF835Q9Y2P0 537 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 ZNF462Q96JM2 2506 aa13.61□□□□□ -0.23
GARNL3-204ENST00000429629 C7orf72A4D263 438 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 C2orf72A6NCS6 295 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 GTPBP1O00178 669 aaKnown RBP13.6□□□□□ -0.23
GARNL3-204ENST00000429629 ETV2O00321 342 aaPredicted RBP13.6□□□□□ -0.23
GARNL3-204ENST00000429629 AQP7O14520 342 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 ZNF264O43296 627 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 ZIC3O60481 467 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 SERPINB7O75635 380 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 PDE9AO76083 593 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 BCHEP06276 602 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 IL7RP16871 459 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 GDF1P27539 372 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 PCGF2P35227 344 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 PGM1P36871 562 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 RFC3P40938 356 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 NUDT2P50583 147 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 P2RX1P51575 399 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 PCBP3P57721 371 aaKnown RBP13.6□□□□□ -0.23
GARNL3-204ENST00000429629 RBPJQ06330 500 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 SCARB2Q14108 478 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 SELPLGQ14242 412 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 LARS2Q15031 903 aaKnown RBP13.6□□□□□ -0.23
GARNL3-204ENST00000429629 CD226Q15762 336 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 CYP51A1Q16850 503 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 VMACQ2NL98 169 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 RABL3Q5HYI8 236 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 Q6ZPB1 254 aaPredicted RBP13.6□□□□□ -0.23
GARNL3-204ENST00000429629 CCDC80Q76M96 950 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 TRPM8Q7Z2W7 1104 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 ZNF440Q8IYI8 595 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 OR10A6Q8NH74 314 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 B4GALNT2Q8NHY0 566 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 NEIL3Q8TAT5 605 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 MAL2Q969L2 176 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 C1GALT1C1Q96EU7 318 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 ZNF607Q96SK3 696 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 SLC39A3Q9BRY0 314 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 DSN1Q9H410 356 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 CACYBPQ9HB71 228 aaKnown RBP13.6□□□□□ -0.23
GARNL3-204ENST00000429629 ARL8BQ9NVJ2 186 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 ABCD2Q9UBJ2 740 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 ICAM5Q9UMF0 924 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 L3MBTL1Q9Y468 752 aa13.6□□□□□ -0.23
GARNL3-204ENST00000429629 GPC6Q9Y625 555 aaPredicted RBP13.6□□□□□ -0.23
GARNL3-204ENST00000429629 NUP214P35658 2090 aaPredicted RBP13.6□□□□□ -0.23
GARNL3-204ENST00000429629 TRGV5A0A0B4J1U4 118 aa13.59□□□□□ -0.23
GARNL3-204ENST00000429629 PRORSD1PA6NEY8 169 aa13.59□□□□□ -0.23
GARNL3-204ENST00000429629 ANKUB1A6NFN9 424 aa13.59□□□□□ -0.23
GARNL3-204ENST00000429629 FAM166BA8MTA8 275 aa13.59□□□□□ -0.23
GARNL3-204ENST00000429629 FAAHO00519 579 aa13.59□□□□□ -0.23
GARNL3-204ENST00000429629 HCRTR2O43614 444 aa13.59□□□□□ -0.23
GARNL3-204ENST00000429629 ACTL6AO96019 429 aa13.59□□□□□ -0.23
GARNL3-204ENST00000429629 CSTAP01040 98 aa13.59□□□□□ -0.23
GARNL3-204ENST00000429629 UBL4AP11441 157 aa13.59□□□□□ -0.23
GARNL3-204ENST00000429629 ESRRAP11474 423 aaPredicted RBP13.59□□□□□ -0.23
GARNL3-204ENST00000429629 CALB2P22676 271 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms