RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 CCR4P51679 360 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 RPS6KA3P51812 740 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 ATP6AP1Q15904 470 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 ZNF630Q2M218 657 aaPredicted RBP8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 DEFB109BQ30KR1 87 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 ARHGAP11BQ3KRB8 267 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 DCAF10Q5QP82 559 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 EXOSC6Q5RKV6 272 aaKnown RBP8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 MRPL2Q5T653 305 aaKnown RBP8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 ATAD3BQ5T9A4 648 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 HLA-DQA1Q5Y7H0 255 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 BHLHB9Q6PI77 547 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 SLC29A4Q7RTT9 530 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 ELP5Q8TE02 316 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 VPS50Q96JG6 964 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 GORASP2Q9H8Y8 452 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 Q9N2J8 555 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 CARD8Q9Y2G2 431 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 PCNX1Q96RV3 2341 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 LOC102723996A0A087X1L8 192 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 SUV39H1O43463 412 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 CDC40O60508 579 aaKnown RBP eCLIP8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 THY1P04216 161 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 GPIP06744 558 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 LIPCP11150 499 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 FUT1P19526 365 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 CCNA2P20248 432 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 IL10P22301 178 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 MYF6P23409 242 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 DCTP40126 519 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 HPCAP84074 193 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 SSPNQ14714 243 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 ZNHIT3Q15649 155 aaPredicted RBP8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 KCTD21Q4G0X4 260 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 OTUD3Q5T2D3 398 aaPredicted RBP8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 KRT80Q6KB66 452 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 CBLL1Q75N03 491 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 NDUFAF7Q7L592 441 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 ZNF441Q8N8Z8 693 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 PAPD5Q8NDF8 572 aaKnown RBP8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 DNAJB8Q8NHS0 232 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 MIPOL1Q8TD10 442 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 GRHL3Q8TE85 626 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 PYURFQ96I23 114 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 C7orf34Q96L11 122 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 LMF2Q9BU23 707 aaKnown RBP8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 BTBD2Q9BX70 525 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 ZNF350Q9GZX5 532 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 OCEL1Q9H607 264 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 CLK4Q9HAZ1 481 aaKnown RBP8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 C8orf4Q9NR00 106 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 KLHL1Q9NR64 748 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 TUBA8Q9NY65 449 aaPredicted RBP8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 TNFRSF10DQ9UBN6 386 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 ANGPT4Q9Y264 503 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 NPFFR2Q9Y5X5 522 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 GPC6Q9Y625 555 aaPredicted RBP8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 LRBAP50851 2863 aa8.74□□□□□ -1.01
HMGCLL1-206ENST00000428842 CCDC160A6NGH7 325 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 ACOX3O15254 700 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 DYRK3O43781 588 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 COQ9O75208 318 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 GMNNO75496 209 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 STX11O75558 287 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 UTS2O95399 124 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 NADKO95544 446 aaPredicted RBP8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 PPIBP23284 216 aaKnown RBP8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 FASP25445 335 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 PSMA4P25789 261 aaKnown RBP8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 PCSK6P29122 969 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 PPICP45877 212 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 SELENOWP63302 87 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 TBC1D25Q3MII6 688 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 IQCCQ4KMZ1 466 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 ZDHHC21Q8IVQ6 265 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 BEST3Q8N1M1 668 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 MORN4Q8NDC4 146 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 ADAMTS16Q8TE57 1224 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 VMP1Q96GC9 406 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 CENPNQ96H22 339 aaPredicted RBP8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 TRNT1Q96Q11 434 aaKnown RBP8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 C9orf16Q9BUW7 83 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 SEMA4CQ9C0C4 833 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 ZNF700Q9H0M5 742 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 NTN4Q9HB63 628 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 TIMMDC1Q9NPL8 285 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 DUSP22Q9NRW4 184 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 EXD2Q9NVH0 621 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 NDUFAF4Q9P032 175 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 ANAPC2Q9UJX6 822 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 PCDHGA6Q9Y5G7 932 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 AGAP5A6NIR3 686 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 TAF4O00268 1085 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 OXSR1O95747 527 aaPredicted RBP8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 CCL3P10147 92 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 UMPSP11172 480 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 FCGR1AP12314 374 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 HTR2AP28223 471 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 GSSP48637 474 aa8.73□□□□□ -1.01
HMGCLL1-206ENST00000428842 VEZF1Q14119 521 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms