RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 HSP90B2PQ58FF3 399 aa20.21■□□□□ 0.83
PTCHD3P2-201ENST00000424937 RIPPLY2Q5TAB7 128 aa20.21■□□□□ 0.83
PTCHD3P2-201ENST00000424937 SP5Q6BEB4 398 aaPredicted RBP20.21■□□□□ 0.83
PTCHD3P2-201ENST00000424937 MSANTD1Q6ZTZ1 278 aa20.21■□□□□ 0.83
PTCHD3P2-201ENST00000424937 XAGE5Q8WWM1 108 aa20.21■□□□□ 0.83
PTCHD3P2-201ENST00000424937 VPS33AQ96AX1 596 aa20.21■□□□□ 0.83
PTCHD3P2-201ENST00000424937 TUBA1CQ9BQE3 449 aa20.21■□□□□ 0.83
PTCHD3P2-201ENST00000424937 PIGQQ9BRB3 760 aa20.21■□□□□ 0.83
PTCHD3P2-201ENST00000424937 RMND5AQ9H871 391 aa20.21■□□□□ 0.83
PTCHD3P2-201ENST00000424937 CHST11Q9NPF2 352 aa20.21■□□□□ 0.83
PTCHD3P2-201ENST00000424937 CACNA1DQ01668 2161 aa20.21■□□□□ 0.83
PTCHD3P2-201ENST00000424937 FAM234BA2RU67 622 aa20.2■□□□□ 0.82
PTCHD3P2-201ENST00000424937 OR2M5A3KFT3 312 aa20.2■□□□□ 0.82
PTCHD3P2-201ENST00000424937 NKX2-6A6NCS4 301 aa20.2■□□□□ 0.82
PTCHD3P2-201ENST00000424937 SHISA8B8ZZ34 492 aa20.2■□□□□ 0.82
PTCHD3P2-201ENST00000424937 H3BNH8 94 aa20.2■□□□□ 0.82
PTCHD3P2-201ENST00000424937 C19orf84I3L1E1 186 aa20.2■□□□□ 0.82
PTCHD3P2-201ENST00000424937 HCRTR2O43614 444 aa20.2■□□□□ 0.82
PTCHD3P2-201ENST00000424937 EDF1O60869 148 aaKnown RBP20.2■□□□□ 0.82
PTCHD3P2-201ENST00000424937 TNFRSF21O75509 655 aa20.2■□□□□ 0.82
PTCHD3P2-201ENST00000424937 STX11O75558 287 aa20.2■□□□□ 0.82
PTCHD3P2-201ENST00000424937 ANP32DO95626 131 aa20.2■□□□□ 0.82
PTCHD3P2-201ENST00000424937 ZNF708P17019 499 aa20.2■□□□□ 0.82
PTCHD3P2-201ENST00000424937 POU3F2P20265 443 aaPredicted RBP20.2■□□□□ 0.82
PTCHD3P2-201ENST00000424937 MSX1P28360 303 aa20.2■□□□□ 0.82
PTCHD3P2-201ENST00000424937 ZNF41P51814 821 aaPredicted RBP20.2■□□□□ 0.82
PTCHD3P2-201ENST00000424937 CLDN18P56856 261 aa20.2■□□□□ 0.82
PTCHD3P2-201ENST00000424937 KLHL26Q53HC5 615 aa20.2■□□□□ 0.82
PTCHD3P2-201ENST00000424937 NSUN5P2Q63ZY6 315 aa20.2■□□□□ 0.82
PTCHD3P2-201ENST00000424937 HEPHL1Q6MZM0 1159 aa20.2■□□□□ 0.82
PTCHD3P2-201ENST00000424937 MTERF4Q7Z6M4 381 aaKnown RBP20.2■□□□□ 0.82
PTCHD3P2-201ENST00000424937 UBQLNLQ8IYU4 475 aa20.2■□□□□ 0.82
PTCHD3P2-201ENST00000424937 LILRB4Q8NHJ6 448 aa20.2■□□□□ 0.82
PTCHD3P2-201ENST00000424937 B4GALNT2Q8NHY0 566 aa20.2■□□□□ 0.82
PTCHD3P2-201ENST00000424937 PNPT1Q8TCS8 783 aaKnown RBP20.2■□□□□ 0.82
PTCHD3P2-201ENST00000424937 UCK2Q9BZX2 261 aa20.2■□□□□ 0.82
PTCHD3P2-201ENST00000424937 ZNF350Q9GZX5 532 aa20.2■□□□□ 0.82
PTCHD3P2-201ENST00000424937 NPHS2Q9NP85 383 aa20.2■□□□□ 0.82
PTCHD3P2-201ENST00000424937 SLC6A13Q9NSD5 602 aa20.2■□□□□ 0.82
PTCHD3P2-201ENST00000424937 PKDREJQ9NTG1 2253 aa20.2■□□□□ 0.82
PTCHD3P2-201ENST00000424937 NPIPB9F8W1W9 429 aa20.19■□□□□ 0.82
PTCHD3P2-201ENST00000424937 H3BML4 177 aa20.19■□□□□ 0.82
PTCHD3P2-201ENST00000424937 FCMRO60667 390 aa20.19■□□□□ 0.82
PTCHD3P2-201ENST00000424937 TOXO94900 526 aa20.19■□□□□ 0.82
PTCHD3P2-201ENST00000424937 MRPL19P49406 292 aaKnown RBP20.19■□□□□ 0.82
PTCHD3P2-201ENST00000424937 HPCAP84074 193 aa20.19■□□□□ 0.82
PTCHD3P2-201ENST00000424937 ZNF117Q03924 483 aa20.19■□□□□ 0.82
PTCHD3P2-201ENST00000424937 FUT5Q11128 374 aa20.19■□□□□ 0.82
PTCHD3P2-201ENST00000424937 C6orf10Q5SRN2 563 aa20.19■□□□□ 0.82
PTCHD3P2-201ENST00000424937 PDZK1Q5T2W1 519 aa20.19■□□□□ 0.82
PTCHD3P2-201ENST00000424937 CRYBG3Q68DQ2 2970 aa20.19■□□□□ 0.82
PTCHD3P2-201ENST00000424937 ARFGAP2Q8N6H7 521 aa20.19■□□□□ 0.82
PTCHD3P2-201ENST00000424937 TNIP2Q8NFZ5 429 aa20.19■□□□□ 0.82
PTCHD3P2-201ENST00000424937 ZPLD1Q8TCW7 415 aa20.19■□□□□ 0.82
PTCHD3P2-201ENST00000424937 SMPDL3BQ92485 455 aa20.19■□□□□ 0.82
PTCHD3P2-201ENST00000424937 ROPN1LQ96C74 230 aa20.19■□□□□ 0.82
PTCHD3P2-201ENST00000424937 ITCHQ96J02 903 aa20.19■□□□□ 0.82
PTCHD3P2-201ENST00000424937 NMUR2Q9GZQ4 415 aa20.19■□□□□ 0.82
PTCHD3P2-201ENST00000424937 DCTN4Q9UJW0 460 aa20.19■□□□□ 0.82
PTCHD3P2-201ENST00000424937 MKLN1Q9UL63 735 aa20.19■□□□□ 0.82
PTCHD3P2-201ENST00000424937 DTNAQ9Y4J8 743 aa20.19■□□□□ 0.82
PTCHD3P2-201ENST00000424937 UNC79Q9P2D8 2635 aa20.18■□□□□ 0.82
PTCHD3P2-201ENST00000424937 CD8B2A6NJW9 211 aa20.18■□□□□ 0.82
PTCHD3P2-201ENST00000424937 CLCA1A8K7I4 914 aa20.18■□□□□ 0.82
PTCHD3P2-201ENST00000424937 HSPB2A8KAH6 182 aa20.18■□□□□ 0.82
PTCHD3P2-201ENST00000424937 GTPBP1O00178 669 aaKnown RBP20.18■□□□□ 0.82
PTCHD3P2-201ENST00000424937 HMGN4O00479 90 aa20.18■□□□□ 0.82
PTCHD3P2-201ENST00000424937 NR5A2O00482 541 aa20.18■□□□□ 0.82
PTCHD3P2-201ENST00000424937 OIP5O43482 229 aa20.18■□□□□ 0.82
PTCHD3P2-201ENST00000424937 PEPDP12955 493 aa20.18■□□□□ 0.82
PTCHD3P2-201ENST00000424937 ANXA11P50995 505 aaKnown RBP20.18■□□□□ 0.82
PTCHD3P2-201ENST00000424937 HSPB2Q16082 182 aa20.18■□□□□ 0.82
PTCHD3P2-201ENST00000424937 NDUFAF6Q330K2 333 aa20.18■□□□□ 0.82
PTCHD3P2-201ENST00000424937 GLYR1Q49A26 553 aaPredicted RBP20.18■□□□□ 0.82
PTCHD3P2-201ENST00000424937 GPAT3Q53EU6 434 aa20.18■□□□□ 0.82
PTCHD3P2-201ENST00000424937 NAXEQ8NCW5 288 aa20.18■□□□□ 0.82
PTCHD3P2-201ENST00000424937 RFWD2Q8NHY2 731 aa20.18■□□□□ 0.82
PTCHD3P2-201ENST00000424937 KLHDC3Q9BQ90 382 aa20.18■□□□□ 0.82
PTCHD3P2-201ENST00000424937 MED17Q9NVC6 651 aa20.18■□□□□ 0.82
PTCHD3P2-201ENST00000424937 CARD8Q9Y2G2 431 aa20.18■□□□□ 0.82
PTCHD3P2-201ENST00000424937 ZNF337Q9Y3M9 751 aa20.18■□□□□ 0.82
PTCHD3P2-201ENST00000424937 WDR45Q9Y484 360 aa20.18■□□□□ 0.82
PTCHD3P2-201ENST00000424937 A0A087WZY1 265 aa20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 CENPVL1A0A0U1RR11 272 aa20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 MBD3L4A6NDZ8 208 aaPredicted RBP20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 MBD3L3A6NE82 208 aaPredicted RBP20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 MBD3L5A6NJ08 208 aaPredicted RBP20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 SEC14L5O43304 696 aa20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 KIAA0513O60268 411 aa20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 KRT75O95678 551 aa20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 NUDT14O95848 222 aa20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 IL2RAP01589 272 aa20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 SNRPB2P08579 225 aaKnown RBP20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 ZNF17P17021 662 aa20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 TIMP3P35625 211 aa20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 SQLEQ14534 574 aa20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 BCL2A1Q16548 175 aa20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 PLPPR5Q32ZL2 321 aa20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 GTDC1Q4AE62 458 aa20.17■□□□□ 0.82
PTCHD3P2-201ENST00000424937 COX20Q5RI15 118 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms