RNA–Protein interactions for RNA: ENST00000422395.1

CCR9-204, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 1,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-204ENST00000422395 SIPA1Q96FS4 1042 aa6.5□□□□□ -1.37
CCR9-204ENST00000422395 SLC6A18Q96N87 628 aa6.5□□□□□ -1.37
CCR9-204ENST00000422395 NECTIN4Q96NY8 510 aa6.5□□□□□ -1.37
CCR9-204ENST00000422395 OR2A7Q96R45 310 aa6.5□□□□□ -1.37
CCR9-204ENST00000422395 SLC38A3Q99624 504 aa6.5□□□□□ -1.37
CCR9-204ENST00000422395 SEC22CQ9BRL7 303 aa6.5□□□□□ -1.37
CCR9-204ENST00000422395 NKX6-2Q9C056 277 aaPredicted RBP6.5□□□□□ -1.37
CCR9-204ENST00000422395 CXCL16Q9H2A7 254 aa6.5□□□□□ -1.37
CCR9-204ENST00000422395 PIGMQ9H3S5 423 aa6.5□□□□□ -1.37
CCR9-204ENST00000422395 SAV1Q9H4B6 383 aaPredicted RBP6.5□□□□□ -1.37
CCR9-204ENST00000422395 WDR26Q9H7D7 661 aa6.5□□□□□ -1.37
CCR9-204ENST00000422395 MYNNQ9NPC7 610 aa6.5□□□□□ -1.37
CCR9-204ENST00000422395 TRIM36Q9NQ86 728 aa6.5□□□□□ -1.37
CCR9-204ENST00000422395 H2AFY2Q9P0M6 372 aaPredicted RBP6.5□□□□□ -1.37
CCR9-204ENST00000422395 PTGFRNQ9P2B2 879 aa6.5□□□□□ -1.37
CCR9-204ENST00000422395 CRLS1Q9UJA2 301 aa6.5□□□□□ -1.37
CCR9-204ENST00000422395 ACSL6Q9UKU0 697 aa6.5□□□□□ -1.37
CCR9-204ENST00000422395 PPIEQ9UNP9 301 aaKnown RBP6.5□□□□□ -1.37
CCR9-204ENST00000422395 PLCL2Q9UPR0 1127 aa6.5□□□□□ -1.37
CCR9-204ENST00000422395 ICKQ9UPZ9 632 aa6.5□□□□□ -1.37
CCR9-204ENST00000422395 EXO1Q9UQ84 846 aaKnown RBP6.5□□□□□ -1.37
CCR9-204ENST00000422395 SLC9A8Q9Y2E8 581 aa6.5□□□□□ -1.37
CCR9-204ENST00000422395 SLC6A5Q9Y345 797 aa6.5□□□□□ -1.37
CCR9-204ENST00000422395 SPTBN4Q9H254 2564 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 TRAV1-2A0A0B4J238 106 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 A0A0D9SG52 128 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 CXorf51AA0A1B0GTR3 108 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.49□□□□□ -1.37
CCR9-204ENST00000422395 TMEM82A0PJX8 343 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 RAB19A4D1S5 217 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 MCRIP1C9JLW8 97 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 MCIDASD6RGH6 385 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 H3BNC9 293 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 DNASE2O00115 360 aaPredicted RBP6.49□□□□□ -1.37
CCR9-204ENST00000422395 GTPBP1O00178 669 aaKnown RBP6.49□□□□□ -1.37
CCR9-204ENST00000422395 FOXE1O00358 373 aaPredicted RBP6.49□□□□□ -1.37
CCR9-204ENST00000422395 RNF13O43567 381 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 TLR5O60602 858 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 PRAMEF2O60811 474 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 FZD7O75084 574 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 FGF18O76093 207 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 OAZ2O95190 189 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 HIST1H2ABP04908 130 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 PIRTP0C851 137 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 PRSS56P0CW18 603 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 ETFAP13804 333 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 POU2F1P14859 743 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 GABRA1P14867 456 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 IL9P15248 144 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 EPORP19235 508 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 PSMB1P20618 241 aaKnown RBP6.49□□□□□ -1.37
CCR9-204ENST00000422395 GIFP27352 417 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 HOXD9P28356 352 aaPredicted RBP6.49□□□□□ -1.37
CCR9-204ENST00000422395 AQP1P29972 269 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 PPP2R1BP30154 601 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 HTR1FP30939 366 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 CTNNB1P35222 781 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 FAUP35544 74 aaKnown RBP6.49□□□□□ -1.37
CCR9-204ENST00000422395 SPAM1P38567 509 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 GDF5P43026 501 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 OR1E2P47887 323 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 CSNK1DP48730 415 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 CDKN1CP49918 316 aaPredicted RBP6.49□□□□□ -1.37
CCR9-204ENST00000422395 NR0B1P51843 470 aaKnown RBP6.49□□□□□ -1.37
CCR9-204ENST00000422395 MVDP53602 400 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 GAS1P54826 345 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 DLX5P56178 289 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 MAZP56270 477 aaKnown RBP6.49□□□□□ -1.37
CCR9-204ENST00000422395 SEC61A1P61619 476 aaKnown RBP6.49□□□□□ -1.37
CCR9-204ENST00000422395 POLR2GP62487 172 aaKnown RBP eCLIP6.49□□□□□ -1.37
CCR9-204ENST00000422395 RPL6Q02878 288 aaKnown RBP6.49□□□□□ -1.37
CCR9-204ENST00000422395 GAB1Q13480 694 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 ST3GAL2Q16842 350 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 PTCHD3Q3KNS1 767 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 SLC36A2Q495M3 483 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 CYP27C1Q4G0S4 372 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 TCEAL5Q5H9L2 206 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 PRAMEF8Q5VWM4 474 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 PRAMEF7Q5VXH5 474 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 GSG1LQ6UXU4 331 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 CEACAM20Q6UY09 585 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 ASB18Q6ZVZ8 466 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 HTR3DQ70Z44 454 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 HIST3H2AQ7L7L0 130 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 KIAA0907Q7Z7F0 614 aaPredicted RBP6.49□□□□□ -1.37
CCR9-204ENST00000422395 GLCCI1Q86VQ1 547 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 FAM217AQ8IXS0 508 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 ARMC10Q8N2F6 343 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 SLC44A3Q8N4M1 653 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 PNPLA1Q8N8W4 532 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 DTX3Q8N9I9 347 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 ZNF527Q8NB42 609 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 OR5M9Q8NGP3 310 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 OR6K3Q8NGY3 331 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 SCAMP5Q8TAC9 235 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 SMIM4Q8WVI0 70 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 APOBEC4Q8WW27 367 aaKnown RBP6.49□□□□□ -1.37
CCR9-204ENST00000422395 ASB11Q8WXH4 323 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 GATAD2BQ8WXI9 593 aa6.49□□□□□ -1.37
CCR9-204ENST00000422395 NSMAFQ92636 917 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms