RNA–Protein interactions for RNA: ENST00000421922.6

CCDC28B-202, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 1 (best) BASIC

Gene CCDC28B, Length 1,415 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-202ENST00000421922 TP53I11O14683 189 aa15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 PEX1O43933 1283 aa15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 DPM1O60762 260 aa15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 NADKO95544 446 aaPredicted RBP15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 EPPINO95925 133 aa15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 NGFRP08138 427 aa15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 UBTFL6P0CB48 400 aaPredicted RBP15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 UBL4AP11441 157 aa15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 UQCRBP14927 111 aa15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 FPR1P21462 350 aa15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 EVI2BP34910 448 aa15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 AIMP2Q13155 320 aaKnown RBP15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 GK3PQ14409 553 aa15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 FGD3Q5JSP0 725 aa15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 NUP54Q7Z3B4 507 aa15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 STK32CQ86UX6 486 aa15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 COMTD1Q86VU5 262 aa15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 RBM45Q8IUH3 476 aaKnown RBP15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 GRAMD2AQ8IUY3 354 aa15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 DND1Q8IYX4 353 aaKnown RBP15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 TMEM156Q8N614 296 aa15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 GATSQ8NAP1 163 aa15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 PIK3C3Q8NEB9 887 aa15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 OR4D11Q8NGI4 311 aa15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 ADAMTS17Q8TE56 1095 aa15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 SLC35B4Q969S0 331 aa15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 THOC3Q96J01 351 aaKnown RBP15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 RASL10BQ96S79 203 aa15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 EPYCQ99645 322 aa15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 ATP13A2Q9NQ11 1180 aa15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 FLRT3Q9NZU0 649 aa15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 ABI3Q9P2A4 366 aa15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 KIF17Q9P2E2 1029 aa15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 TEKT2Q9UIF3 430 aa15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 RALYQ9UKM9 306 aaKnown RBP15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 TMCC3Q9ULS5 477 aa15.74■□□□□ 0.11
CCDC28B-202ENST00000421922 A0A1W2PQD3 144 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 PRAMEF25A6NGN4 478 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 TMEM200CA6NKL6 621 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 CPSF4LA6NMK7 179 aaKnown RBP15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 NDUFB5O43674 189 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 SCO2O43819 266 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 PRSS23O95084 383 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 H1F0P07305 194 aaKnown RBP15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 GKN3PP0CG01 181 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 ITGA3P26006 1051 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 CCR4P51679 360 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 RRADP55042 308 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 FBXW4P57775 412 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 FOXD4Q12950 439 aaPredicted RBP15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 CHAF1BQ13112 559 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 KLHL26Q53HC5 615 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 COLEC12Q5KU26 742 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 OTUD3Q5T2D3 398 aaPredicted RBP15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 FCRLBQ6BAA4 426 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 IZUMO2Q6UXV1 221 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 MISPQ8IVT2 679 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 GALNT4Q8N4A0 578 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 PACRGLQ8N7B6 248 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 THAP4Q8WY91 577 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 CNOT9Q92600 299 aaKnown RBP15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 TTC9Q92623 222 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 SPACA9Q96E40 222 aaPredicted RBP15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 ZNF559Q9BR84 538 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 SCNM1Q9BWG6 230 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 POLR2J2Q9GZM3 115 aaKnown RBP15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 POLR2J3Q9H1A7 115 aaKnown RBP15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 METTL7AQ9H8H3 244 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 NTN4Q9HB63 628 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 TMEM27Q9HBJ8 222 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 CTPS2Q9NRF8 586 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 DNAJB12Q9NXW2 375 aaKnown RBP15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 KLRF1Q9NZS2 232 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 SELENONQ9NZV5 590 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 RHCGQ9UBD6 479 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 RPS6KB2Q9UBS0 482 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 ORC6Q9Y5N6 252 aa15.73■□□□□ 0.11
CCDC28B-202ENST00000421922 FBXO45P0C2W1 286 aa15.72■□□□□ 0.11
CCDC28B-202ENST00000421922 SOX3P41225 446 aa15.72■□□□□ 0.11
CCDC28B-202ENST00000421922 IST1P53990 364 aa15.72■□□□□ 0.11
CCDC28B-202ENST00000421922 MLF1P58340 268 aa15.72■□□□□ 0.11
CCDC28B-202ENST00000421922 COPZ1P61923 177 aa15.72■□□□□ 0.11
CCDC28B-202ENST00000421922 PPP1R8Q12972 351 aaKnown RBP15.72■□□□□ 0.11
CCDC28B-202ENST00000421922 MEP1AQ16819 746 aa15.72■□□□□ 0.11
CCDC28B-202ENST00000421922 IQCCQ4KMZ1 466 aa15.72■□□□□ 0.11
CCDC28B-202ENST00000421922 DCAF10Q5QP82 559 aa15.72■□□□□ 0.11
CCDC28B-202ENST00000421922 SHQ1Q6PI26 577 aaKnown RBP15.72■□□□□ 0.11
CCDC28B-202ENST00000421922 PACS2Q86VP3 889 aa15.72■□□□□ 0.11
CCDC28B-202ENST00000421922 CBR4Q8N4T8 237 aa15.72■□□□□ 0.11
CCDC28B-202ENST00000421922 SIRT6Q8N6T7 355 aa15.72■□□□□ 0.11
CCDC28B-202ENST00000421922 OR52J3Q8NH60 311 aa15.72■□□□□ 0.11
CCDC28B-202ENST00000421922 RNF217Q8TC41 542 aa15.72■□□□□ 0.11
CCDC28B-202ENST00000421922 BRIX1Q8TDN6 353 aaKnown RBP15.72■□□□□ 0.11
CCDC28B-202ENST00000421922 KCNE4Q8WWG9 221 aa15.72■□□□□ 0.11
CCDC28B-202ENST00000421922 NRBF2Q96F24 287 aa15.72■□□□□ 0.11
CCDC28B-202ENST00000421922 NAF1Q96HR8 494 aaKnown RBP15.72■□□□□ 0.11
CCDC28B-202ENST00000421922 COQ10BQ9H8M1 238 aa15.72■□□□□ 0.11
CCDC28B-202ENST00000421922 CHST2Q9Y4C5 530 aa15.72■□□□□ 0.11
CCDC28B-202ENST00000421922 LYVE1Q9Y5Y7 322 aa15.72■□□□□ 0.11
CCDC28B-202ENST00000421922 ZNF891A8MT65 544 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms