RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 CBR4Q8N4T8 237 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 TMCO5AQ8N6Q1 288 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 MAPKAPK5-AS1Q8N8E1 139 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 DNAAF3Q8N9W5 541 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 THAP8Q8NA92 274 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 ZNF555Q8NEP9 628 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 OR11H4Q8NGC9 324 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 SPPL2BQ8TCT7 592 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 PHF10Q8WUB8 498 aaKnown RBP2.38□□□□□ -2.03
VPS41-206ENST00000418457 PHLDA1Q8WV24 401 aaPredicted RBP2.38□□□□□ -2.03
VPS41-206ENST00000418457 CANT1Q8WVQ1 401 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 CYGBQ8WWM9 190 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 RASSF5Q8WWW0 418 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 NTAN1Q96AB6 310 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 VPS33AQ96AX1 596 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 SLCO4A1Q96BD0 722 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 RMDN1Q96DB5 314 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 LGALS12Q96DT0 336 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 L3HYPDHQ96EM0 354 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 GIMAP5Q96F15 307 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 HPDLQ96IR7 371 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 BTN2A3PQ96KV6 586 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 HSFY1Q96LI6 401 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 NSMCE3Q96MG7 304 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 NPAS2Q99743 824 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 SLC29A1Q99808 456 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 CTRCQ99895 268 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 DCUN1D5Q9BTE7 237 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 URM1Q9BTM9 101 aaKnown RBP2.38□□□□□ -2.03
VPS41-206ENST00000418457 KIFC1Q9BW19 673 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 NUSAP1Q9BXS6 441 aaKnown RBP2.38□□□□□ -2.03
VPS41-206ENST00000418457 KRTAP2-2Q9BYT5 123 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 ELOVL4Q9GZR5 314 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 ING2Q9H160 280 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 GBA3Q9H227 469 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 FZD8Q9H461 694 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 WDR55Q9H6Y2 383 aaPredicted RBP2.38□□□□□ -2.03
VPS41-206ENST00000418457 TDRD3Q9H7E2 651 aaKnown RBP2.38□□□□□ -2.03
VPS41-206ENST00000418457 LIN28AQ9H9Z2 209 aaKnown RBP2.38□□□□□ -2.03
VPS41-206ENST00000418457 POPDC3Q9HBV1 291 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 CCNB1IP1Q9NPC3 277 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 CCDC177Q9NQR7 707 aaPredicted RBP2.38□□□□□ -2.03
VPS41-206ENST00000418457 FBXO8Q9NRD0 319 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 SDR39U1Q9NRG7 319 aaPredicted RBP2.38□□□□□ -2.03
VPS41-206ENST00000418457 FGF21Q9NSA1 209 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 SMOXQ9NWM0 555 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 PAK1IP1Q9NWT1 392 aaPredicted RBP2.38□□□□□ -2.03
VPS41-206ENST00000418457 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.38□□□□□ -2.03
VPS41-206ENST00000418457 GTSE1Q9NYZ3 720 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 USE1Q9NZ43 259 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 KLHL8Q9P2G9 620 aaPredicted RBP2.38□□□□□ -2.03
VPS41-206ENST00000418457 ANKMY1Q9P2S6 941 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 PLXNA1Q9UIW2 1896 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 ENPP5Q9UJA9 477 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 LEF1Q9UJU2 399 aaPredicted RBP2.38□□□□□ -2.03
VPS41-206ENST00000418457 TSPAN16Q9UKR8 245 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 VANGL2Q9ULK5 521 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 RNF150Q9ULK6 438 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 STAP1Q9ULZ2 295 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 GAB2Q9UQC2 676 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 RUVBL2Q9Y230 463 aaKnown RBP2.38□□□□□ -2.03
VPS41-206ENST00000418457 NAALAD2Q9Y3Q0 740 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 UGT2A1Q9Y4X1 527 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 RIPK3Q9Y572 518 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 CPQQ9Y646 472 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 HSPE1-MOB4S4R3N1 261 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 LCTP09848 1927 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 PCNTO95613 3336 aa2.38□□□□□ -2.03
VPS41-206ENST00000418457 PDCD11Q14690 1871 aaKnown RBP2.37□□□□□ -2.03
VPS41-206ENST00000418457 MYO18AQ92614 2054 aaKnown RBP2.37□□□□□ -2.03
VPS41-206ENST00000418457 ANKRD36A6QL64 1941 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 RLFQ13129 1914 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 IGHV4-61A0A0C4DH41 118 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 A0A0J9YYE9 177 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 PNMA8CA0A1B0GUJ8 204 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 A0A1W2PP18 115 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 ILVBLA1L0T0 632 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 CLDN24A6NM45 220 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 A8MT66 165 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 A8MXE2 369 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 EVPLLA8MZ36 301 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 TCP10L2B9ZVM9 353 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 C19orf81C9J6K1 198 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 HHLA1C9JL84 531 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 M0R3G1 203 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 EEF2KO00418 725 aaKnown RBP2.37□□□□□ -2.03
VPS41-206ENST00000418457 NME4O00746 187 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 DLGAP1O14490 977 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 EI24O14681 340 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 PTGESO14684 152 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 ZNF197O14709 1029 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 ACOX3O15254 700 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 IDH3BO43837 385 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 MFSD11O43934 449 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 CACNG3O60359 315 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 UGT2B11O75310 529 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 GMNNO75496 209 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 EEDO75530 441 aaKnown RBP2.37□□□□□ -2.03
VPS41-206ENST00000418457 GABARAPO95166 117 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 KRT75O95678 551 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms