RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 PCDHA9Q9Y5H5 950 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 NFS1Q9Y697 457 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-205ENST00000418258 DCDC2BA2VCK2 349 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 M0QZQ0 153 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 M0R3H8 397 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 CBX7O95931 251 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 MMP2P08253 660 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 CAMLGP49069 296 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 SH3BP2P78314 561 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 CNN3Q15417 329 aaKnown RBP10.57□□□□□ -0.72
PTCH1-205ENST00000418258 MEX3BQ6ZN04 569 aaKnown RBP10.57□□□□□ -0.72
PTCH1-205ENST00000418258 CDHR3Q6ZTQ4 885 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 RNF175Q8N4F7 328 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 TP63Q9H3D4 680 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-205ENST00000418258 CNIH4Q9P003 139 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 ICE1Q9Y2F5 2266 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 NPIPA5A0A0B4J1W7 369 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 NPIPA7E9PJI5 369 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 ONECUT3O60422 494 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-205ENST00000418258 NPIPA8P0DM63 369 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 ADARB1P78563 741 aaKnown RBP10.57□□□□□ -0.72
PTCH1-205ENST00000418258 SMAD2Q15796 467 aaKnown RBP10.57□□□□□ -0.72
PTCH1-205ENST00000418258 SLC22A6Q4U2R8 563 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 NADSYN1Q6IA69 706 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 GPR149Q86SP6 731 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 LRRTM3Q86VH5 581 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 PIGCQ92535 297 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 CDS1Q92903 461 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 FKBP10Q96AY3 582 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 MAELQ96JY0 434 aaKnown RBP10.57□□□□□ -0.72
PTCH1-205ENST00000418258 ALG8Q9BVK2 526 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 IL26Q9NPH9 171 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 AIG1Q9NVV5 245 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 SMAD6O43541 496 aaKnown RBP10.57□□□□□ -0.72
PTCH1-205ENST00000418258 SERPINE2P07093 398 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 ACPPP15309 386 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 RPS5P46782 204 aaKnown RBP10.57□□□□□ -0.72
PTCH1-205ENST00000418258 CAMK2DQ13557 499 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 LTC4SQ16873 150 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 ASRGL1Q7L266 308 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 TAS1R1Q7RTX1 841 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 ZMYND19Q96E35 227 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-205ENST00000418258 MGLLQ99685 303 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 C14orf119Q9NWQ9 140 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 SDHAF2Q9NX18 166 aa10.57□□□□□ -0.72
PTCH1-205ENST00000418258 ZNF223Q9UK11 482 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-205ENST00000418258 SDHDO14521 159 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 AP1G1O43747 822 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 FAM189A1O60320 539 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 ZNF44P15621 663 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 MSR1P21757 451 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 HSD11B1LQ7Z5J1 315 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 AGBL5Q8NDL9 886 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 OR7G3Q8NG95 312 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 NEIL2Q969S2 332 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 ZNF778Q96MU6 729 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 FEVQ99581 238 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 HSD3B7Q9H2F3 369 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 ITGB8P26012 769 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 SGPP2Q8IWX5 399 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 ISOC1Q96CN7 298 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 PINK1Q9BXM7 581 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 ARMC1Q9NVT9 282 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 CXXC1Q9P0U4 656 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-205ENST00000418258 RIMS3Q9UJD0 308 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 B3GNT3Q9Y2A9 372 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 CRYBG1Q9Y4K1 1723 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 FUT1P19526 365 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 PCBD1P61457 104 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 LCTLQ6UWM7 567 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 MMP21Q8N119 569 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 TMEM130Q8N3G9 435 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 CYB561A3Q8NBI2 242 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 EDAQ92838 391 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 PBDC1Q9BVG4 233 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 ZNF576Q9H609 170 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 KLHL42Q9P2K6 505 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 LSM5Q9Y4Y9 91 aaKnown RBP10.56□□□□□ -0.72
PTCH1-205ENST00000418258 NUMBLQ9Y6R0 609 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 MRPL33O75394 65 aaKnown RBP10.56□□□□□ -0.72
PTCH1-205ENST00000418258 CX3CR1P49238 355 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 CAV2P51636 162 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 EXOSC7Q15024 291 aaKnown RBP10.56□□□□□ -0.72
PTCH1-205ENST00000418258 NKAIN2Q5VXU1 208 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 DPPA4Q7L190 304 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 MRPL10Q7Z7H8 261 aaKnown RBP10.56□□□□□ -0.72
PTCH1-205ENST00000418258 TMEM150AQ86TG1 271 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 OR5W2Q8NH69 310 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 NDNFQ8TB73 568 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 GPR83Q9NYM4 423 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 IER3IP1Q9Y5U9 82 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 A0A0U1RQS6 177 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 GOSR2O14653 212 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 IFNA10P01566 189 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 OR1D4P47884 311 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 SLC6A11P48066 632 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 GPR50Q13585 617 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 DCST2Q5T1A1 773 aa10.56□□□□□ -0.72
PTCH1-205ENST00000418258 C6orf183Q5T699 404 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms