RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 SURF4O15260 269 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 CDC123O75794 336 aaPredicted RBP7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 SC5DO75845 299 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 SPDEFO95238 335 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 OLFM2O95897 454 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 IGF2P01344 180 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 S100A6P06703 90 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 TYRP1P17643 537 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 CTSCP53634 463 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 ZNF177Q13360 481 aaPredicted RBP7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 TRAM1Q15629 374 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 CCDC157Q569K6 752 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 RNF219Q5W0B1 726 aaPredicted RBP7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 TMEM88Q6PEY1 159 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 TMPRSS9Q7Z410 1059 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 CEACAM19Q7Z692 300 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 APCDD1Q8J025 514 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 KRT78Q8N1N4 520 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 CBARPQ8N350 705 aaPredicted RBP7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 HDDC3Q8N4P3 179 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 C12orf45Q8N5I9 185 aaPredicted RBP7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 SIRT6Q8N6T7 355 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 TMIEQ8NEW7 156 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 OR6S1Q8NH40 331 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 NARS2Q96I59 477 aaKnown RBP7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 NOX3Q9HBY0 568 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 KLHL1Q9NR64 748 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 GSN-AS1Q9NRJ2 163 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 MRPL15Q9P015 296 aaKnown RBP7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 ABRACLQ9P1F3 81 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 FXYD6-FXYD2A0A087WZ82 144 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 EIF3GO75821 320 aaKnown RBP eCLIP7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 KLHL18O94889 574 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 ECDO95905 644 aaPredicted RBP7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 IL5P05113 134 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 SMIM6P0DI80 62 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 SNRPBP14678 240 aaKnown RBP7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 MPGP29372 298 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 MECP2P51608 486 aaKnown RBP7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 TAS2R50P59544 299 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 RHOAP61586 193 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 CLEC12AQ5QGZ9 265 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 TPGS1Q6ZTW0 290 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 TBC1D19Q8N5T2 526 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 RELL2Q8NC24 303 aaPredicted RBP7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 DMBX1Q8NFW5 382 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 RAB8BQ92930 207 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 VOPP1Q96AW1 172 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 ART5Q96L15 291 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 FXYD6Q9H0Q3 95 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 TRIM36Q9NQ86 728 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 AKAP7Q9P0M2 348 aaPredicted RBP7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 MBD1Q9UIS9 605 aaPredicted RBP7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 ICKQ9UPZ9 632 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 NEDD8-MDP1E9PL57 170 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 GNB5O14775 395 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 SERPINA3P01011 423 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 ACAA1P09110 424 aaPredicted RBP7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 ATF1P18846 271 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 TBXA2RP21731 343 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 HNF1BP35680 557 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 SGSHP51688 502 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 DLX5P56178 289 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 TSPAN31Q12999 210 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 TUSC3Q13454 348 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 LRRN1Q6UXK5 716 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 CXXC5Q7LFL8 322 aaKnown RBP7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 LDLRAD3Q86YD5 345 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 PUSL1Q8N0Z8 303 aaKnown RBP7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 SLC44A3Q8N4M1 653 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 TTC9BQ8N6N2 239 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 ACBD7Q8N6N7 88 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 BBS1Q8NFJ9 593 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 OR5W2Q8NH69 310 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 NANPQ8TBE9 248 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 GLYATL2Q8WU03 294 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 FCRL4Q96PJ5 515 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 ZNF251Q9BRH9 671 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 ALG8Q9BVK2 526 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 SLC6A16Q9GZN6 736 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 MED17Q9NVC6 651 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 RASL12Q9NYN1 266 aa7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 NFKBIL1Q9UBC1 381 aaPredicted RBP7.49□□□□□ -1.21
HMGXB4-202ENST00000418170 DISC1C4P0D8 188 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 SGCEO43556 437 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 PLPP2O43688 288 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 CH25HO95992 272 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 ITGB8P26012 769 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 GKP32189 559 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 CSNK1DP48730 415 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 AP3S2P59780 193 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 PLEKHS1Q5SXH7 462 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 PRAMEF13Q5VWM6 474 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 ARL9Q6T311 187 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 TMEM151BQ8IW70 566 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 OR4Q3Q8NH05 313 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 ABHD4Q8TB40 342 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 MED8Q96G25 268 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 PRRC1Q96M27 445 aa7.48□□□□□ -1.21
HMGXB4-202ENST00000418170 TSNAXQ99598 290 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms