RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 PARD6BQ9BYG5 372 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 ACBD3Q9H3P7 528 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 PIGMQ9H3S5 423 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 TMEM185BQ9H7F4 350 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 MED17Q9NVC6 651 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 GIN1Q9NXP7 522 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 SNX8Q9Y5X2 465 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 DSCAMO60469 2012 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 ARID1AO14497 2285 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 MAP1AP78559 2803 aaPredicted RBP13.56□□□□□ -0.24
UBXN4-203ENST00000416538 ZFHX3Q15911 3703 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 WDR91A4D1P6 747 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 MSTNO14793 375 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 TNFRSF21O75509 655 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 SMNDC1O75940 238 aaKnown RBP eCLIP13.56□□□□□ -0.24
UBXN4-203ENST00000416538 ATE1O95260 518 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 OPN1LWP04000 364 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 CD1EP15812 388 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 ZNF17P17021 662 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 MAPK1P28482 360 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 CLK3P49761 638 aaKnown RBP13.56□□□□□ -0.24
UBXN4-203ENST00000416538 RPS26P62854 115 aaKnown RBP13.56□□□□□ -0.24
UBXN4-203ENST00000416538 HBA1P69905 142 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 POU6F2P78424 691 aaPredicted RBP13.56□□□□□ -0.24
UBXN4-203ENST00000416538 ZNF117Q03924 483 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 TP53BP2Q13625 1128 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 CHI3L2Q15782 390 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 PDCD2Q16342 344 aaPredicted RBP13.56□□□□□ -0.24
UBXN4-203ENST00000416538 NDUFAF6Q330K2 333 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 GLYR1Q49A26 553 aaPredicted RBP13.56□□□□□ -0.24
UBXN4-203ENST00000416538 TNFAIP8L3Q5GJ75 292 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 ZCCHC12Q6PEW1 402 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 CBLN3Q6UW01 205 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 C22orf34Q6ZV56 151 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 OLIG3Q7RTU3 272 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 CLECL1Q8IZS7 167 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 CLEC4FQ8N1N0 589 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 GTPBP8Q8N3Z3 284 aaPredicted RBP13.56□□□□□ -0.24
UBXN4-203ENST00000416538 GOT1L1Q8NHS2 421 aaPredicted RBP13.56□□□□□ -0.24
UBXN4-203ENST00000416538 OR5P2Q8WZ92 322 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 TUBGCP3Q96CW5 907 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 ARSGQ96EG1 525 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 RNF145Q96MT1 663 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 STACQ99469 402 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 BTBD2Q9BX70 525 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 PIGUQ9H490 435 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 DUSP22Q9NRW4 184 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 ZNF175Q9Y473 711 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 AP4B1Q9Y6B7 739 aa13.56□□□□□ -0.24
UBXN4-203ENST00000416538 CENPVL1A0A0U1RR11 272 aa13.55□□□□□ -0.24
UBXN4-203ENST00000416538 A0A1W2PQD3 144 aa13.55□□□□□ -0.24
UBXN4-203ENST00000416538 C7orf72A4D263 438 aa13.55□□□□□ -0.24
UBXN4-203ENST00000416538 NPIPB9F8W1W9 429 aa13.55□□□□□ -0.24
UBXN4-203ENST00000416538 EIF1AYO14602 144 aaKnown RBP13.55□□□□□ -0.24
UBXN4-203ENST00000416538 CRHP06850 196 aa13.55□□□□□ -0.24
UBXN4-203ENST00000416538 LINGO3P0C6S8 592 aa13.55□□□□□ -0.24
UBXN4-203ENST00000416538 NID1P14543 1247 aa13.55□□□□□ -0.24
UBXN4-203ENST00000416538 CCT3P49368 545 aaKnown RBP13.55□□□□□ -0.24
UBXN4-203ENST00000416538 C21orf58P58505 322 aa13.55□□□□□ -0.24
UBXN4-203ENST00000416538 FOXF1Q12946 379 aa13.55□□□□□ -0.24
UBXN4-203ENST00000416538 CPTPQ5TA50 214 aa13.55□□□□□ -0.24
UBXN4-203ENST00000416538 OR2A2Q6IF42 318 aa13.55□□□□□ -0.24
UBXN4-203ENST00000416538 CAMKMTQ7Z624 323 aa13.55□□□□□ -0.24
UBXN4-203ENST00000416538 NUDCD3Q8IVD9 361 aa13.55□□□□□ -0.24
UBXN4-203ENST00000416538 OR5D16Q8NGK9 328 aa13.55□□□□□ -0.24
UBXN4-203ENST00000416538 OR10D3Q8NH80 312 aa13.55□□□□□ -0.24
UBXN4-203ENST00000416538 PGM2Q96G03 612 aa13.55□□□□□ -0.24
UBXN4-203ENST00000416538 DACH2Q96NX9 599 aa13.55□□□□□ -0.24
UBXN4-203ENST00000416538 ACTRT3Q9BYD9 372 aa13.55□□□□□ -0.24
UBXN4-203ENST00000416538 UBQLN4Q9NRR5 601 aa13.55□□□□□ -0.24
UBXN4-203ENST00000416538 ASIC5Q9NY37 505 aa13.55□□□□□ -0.24
UBXN4-203ENST00000416538 CLEC4AQ9UMR7 237 aa13.55□□□□□ -0.24
UBXN4-203ENST00000416538 VPS13CQ709C8 3753 aa13.54□□□□□ -0.24
UBXN4-203ENST00000416538 A0A0J9YW62 118 aa13.54□□□□□ -0.24
UBXN4-203ENST00000416538 DEFB108AA8MXU0 73 aa13.54□□□□□ -0.24
UBXN4-203ENST00000416538 LINC01387J3KSC0 135 aa13.54□□□□□ -0.24
UBXN4-203ENST00000416538 EFNA2O43921 213 aa13.54□□□□□ -0.24
UBXN4-203ENST00000416538 HSPA4LO95757 839 aa13.54□□□□□ -0.24
UBXN4-203ENST00000416538 C1QCP02747 245 aa13.54□□□□□ -0.24
UBXN4-203ENST00000416538 SERPINE1P05121 402 aa13.54□□□□□ -0.24
UBXN4-203ENST00000416538 RPL3P39023 403 aaKnown RBP13.54□□□□□ -0.24
UBXN4-203ENST00000416538 CD79BP40259 229 aa13.54□□□□□ -0.24
UBXN4-203ENST00000416538 EIF1AXP47813 144 aaKnown RBP13.54□□□□□ -0.24
UBXN4-203ENST00000416538 PHC1P78364 1004 aa13.54□□□□□ -0.24
UBXN4-203ENST00000416538 TOMM34Q15785 309 aaPredicted RBP13.54□□□□□ -0.24
UBXN4-203ENST00000416538 DCST2Q5T1A1 773 aa13.54□□□□□ -0.24
UBXN4-203ENST00000416538 OR4F3Q6IEY1 312 aa13.54□□□□□ -0.24
UBXN4-203ENST00000416538 CHMP1BQ7LBR1 199 aa13.54□□□□□ -0.24
UBXN4-203ENST00000416538 ZNF550Q7Z398 422 aa13.54□□□□□ -0.24
UBXN4-203ENST00000416538 KRTAP1-3Q8IUG1 177 aa13.54□□□□□ -0.24
UBXN4-203ENST00000416538 OR56A1Q8NGH5 318 aa13.54□□□□□ -0.24
UBXN4-203ENST00000416538 SFXN5Q8TD22 340 aa13.54□□□□□ -0.24
UBXN4-203ENST00000416538 MARK4Q96L34 752 aa13.54□□□□□ -0.24
UBXN4-203ENST00000416538 WFIKKN1Q96NZ8 548 aa13.54□□□□□ -0.24
UBXN4-203ENST00000416538 OR7D2Q96RA2 312 aa13.54□□□□□ -0.24
UBXN4-203ENST00000416538 DUSP26Q9BV47 211 aa13.54□□□□□ -0.24
UBXN4-203ENST00000416538 TMUB1Q9BVT8 246 aa13.54□□□□□ -0.24
UBXN4-203ENST00000416538 BHLHE41Q9C0J9 482 aaPredicted RBP13.54□□□□□ -0.24
UBXN4-203ENST00000416538 KLHL28Q9NXS3 571 aa13.54□□□□□ -0.24
UBXN4-203ENST00000416538 C6orf203Q9P0P8 240 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms