RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 ADAM11O75078 769 aa13.69□□□□□ -0.22
DDX56-202ENST00000415758 OXSR1O95747 527 aaPredicted RBP13.69□□□□□ -0.22
DDX56-202ENST00000415758 F12P00748 615 aaPredicted RBP13.69□□□□□ -0.22
DDX56-202ENST00000415758 CD8AP01732 235 aa13.69□□□□□ -0.22
DDX56-202ENST00000415758 PRPS2P11908 318 aa13.69□□□□□ -0.22
DDX56-202ENST00000415758 ME2P23368 584 aa13.69□□□□□ -0.22
DDX56-202ENST00000415758 LCN1P31025 176 aa13.69□□□□□ -0.22
DDX56-202ENST00000415758 SLC7A5Q01650 507 aa13.69□□□□□ -0.22
DDX56-202ENST00000415758 SLC18A2Q05940 514 aa13.69□□□□□ -0.22
DDX56-202ENST00000415758 LCP2Q13094 533 aa13.69□□□□□ -0.22
DDX56-202ENST00000415758 P2RY6Q15077 328 aa13.69□□□□□ -0.22
DDX56-202ENST00000415758 ZNF239Q16600 458 aaKnown RBP13.69□□□□□ -0.22
DDX56-202ENST00000415758 VPS26BQ4G0F5 336 aa13.69□□□□□ -0.22
DDX56-202ENST00000415758 GLE1Q53GS7 698 aaKnown RBP13.69□□□□□ -0.22
DDX56-202ENST00000415758 TEX35Q5T0J7 233 aa13.69□□□□□ -0.22
DDX56-202ENST00000415758 IKBIPQ70UQ0 350 aa13.69□□□□□ -0.22
DDX56-202ENST00000415758 LCA5Q86VQ0 697 aa13.69□□□□□ -0.22
DDX56-202ENST00000415758 MISPQ8IVT2 679 aa13.69□□□□□ -0.22
DDX56-202ENST00000415758 LILRA2Q8N149 483 aa13.69□□□□□ -0.22
DDX56-202ENST00000415758 POC1BQ8TC44 478 aa13.69□□□□□ -0.22
DDX56-202ENST00000415758 PIWIL2Q8TC59 973 aaKnown RBP13.69□□□□□ -0.22
DDX56-202ENST00000415758 PIK3R3Q92569 461 aa13.69□□□□□ -0.22
DDX56-202ENST00000415758 NEUROG1Q92886 237 aa13.69□□□□□ -0.22
DDX56-202ENST00000415758 L3HYPDHQ96EM0 354 aa13.69□□□□□ -0.22
DDX56-202ENST00000415758 KLHL15Q96M94 604 aa13.69□□□□□ -0.22
DDX56-202ENST00000415758 TRAF4Q9BUZ4 470 aaPredicted RBP13.69□□□□□ -0.22
DDX56-202ENST00000415758 TRIM2Q9C040 744 aa13.69□□□□□ -0.22
DDX56-202ENST00000415758 CDC42EP4Q9H3Q1 356 aaKnown RBP13.69□□□□□ -0.22
DDX56-202ENST00000415758 BARX1Q9HBU1 254 aaPredicted RBP13.69□□□□□ -0.22
DDX56-202ENST00000415758 TMEM216Q9P0N5 145 aa13.69□□□□□ -0.22
DDX56-202ENST00000415758 YLPM1P49750 1951 aaKnown RBP13.69□□□□□ -0.22
DDX56-202ENST00000415758 DPRXA6NFQ7 191 aa13.68□□□□□ -0.22
DDX56-202ENST00000415758 NDUFS7O75251 213 aa13.68□□□□□ -0.22
DDX56-202ENST00000415758 LINGO3P0C6S8 592 aa13.68□□□□□ -0.22
DDX56-202ENST00000415758 FAM157CP0CG43 387 aa13.68□□□□□ -0.22
DDX56-202ENST00000415758 IL32P24001 234 aa13.68□□□□□ -0.22
DDX56-202ENST00000415758 ATP5F1P24539 256 aaPredicted RBP13.68□□□□□ -0.22
DDX56-202ENST00000415758 EIF1P41567 113 aaKnown RBP13.68□□□□□ -0.22
DDX56-202ENST00000415758 ZNF41P51814 821 aaPredicted RBP13.68□□□□□ -0.22
DDX56-202ENST00000415758 PRKAA2P54646 552 aa13.68□□□□□ -0.22
DDX56-202ENST00000415758 MANFP55145 182 aaKnown RBP13.68□□□□□ -0.22
DDX56-202ENST00000415758 BSPH1Q075Z2 132 aa13.68□□□□□ -0.22
DDX56-202ENST00000415758 ITGADQ13349 1161 aa13.68□□□□□ -0.22
DDX56-202ENST00000415758 TSC22D1Q15714 1073 aa13.68□□□□□ -0.22
DDX56-202ENST00000415758 SPDYAQ5MJ70 313 aa13.68□□□□□ -0.22
DDX56-202ENST00000415758 TMEM201Q5SNT2 666 aa13.68□□□□□ -0.22
DDX56-202ENST00000415758 ALKBH2Q6NS38 261 aa13.68□□□□□ -0.22
DDX56-202ENST00000415758 NUFIP2Q7Z417 695 aaKnown RBP13.68□□□□□ -0.22
DDX56-202ENST00000415758 TRIM46Q7Z4K8 759 aa13.68□□□□□ -0.22
DDX56-202ENST00000415758 DTX2Q86UW9 622 aa13.68□□□□□ -0.22
DDX56-202ENST00000415758 SLC22A9Q8IVM8 553 aa13.68□□□□□ -0.22
DDX56-202ENST00000415758 MMGT1Q8N4V1 131 aa13.68□□□□□ -0.22
DDX56-202ENST00000415758 GPR151Q8TDV0 419 aa13.68□□□□□ -0.22
DDX56-202ENST00000415758 ABHD3Q8WU67 409 aa13.68□□□□□ -0.22
DDX56-202ENST00000415758 ROBO4Q8WZ75 1007 aa13.68□□□□□ -0.22
DDX56-202ENST00000415758 KISS1RQ969F8 398 aaPredicted RBP13.68□□□□□ -0.22
DDX56-202ENST00000415758 CPNE4Q96A23 557 aaPredicted RBP13.68□□□□□ -0.22
DDX56-202ENST00000415758 TSPYL1Q9H0U9 437 aa13.68□□□□□ -0.22
DDX56-202ENST00000415758 TIGARQ9NQ88 270 aa13.68□□□□□ -0.22
DDX56-202ENST00000415758 NTMQ9P121 344 aa13.68□□□□□ -0.22
DDX56-202ENST00000415758 KLHL13Q9P2N7 655 aa13.68□□□□□ -0.22
DDX56-202ENST00000415758 ALPK2Q86TB3 2170 aa13.68□□□□□ -0.22
DDX56-202ENST00000415758 A0A096LNT2 108 aa13.67□□□□□ -0.22
DDX56-202ENST00000415758 A0A1W2PQD3 144 aa13.67□□□□□ -0.22
DDX56-202ENST00000415758 POC1B-GALNT4F8VUJ3 575 aa13.67□□□□□ -0.22
DDX56-202ENST00000415758 PHF1O43189 567 aaPredicted RBP13.67□□□□□ -0.22
DDX56-202ENST00000415758 SNRPAP09012 282 aaKnown RBP13.67□□□□□ -0.22
DDX56-202ENST00000415758 NRF1Q16656 503 aa13.67□□□□□ -0.22
DDX56-202ENST00000415758 TIFABQ6ZNK6 161 aa13.67□□□□□ -0.22
DDX56-202ENST00000415758 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.67□□□□□ -0.22
DDX56-202ENST00000415758 ZNF551Q7Z340 670 aaPredicted RBP13.67□□□□□ -0.22
DDX56-202ENST00000415758 ATG4DQ86TL0 474 aaPredicted RBP13.67□□□□□ -0.22
DDX56-202ENST00000415758 TDRPQ86YL5 185 aa13.67□□□□□ -0.22
DDX56-202ENST00000415758 TUSC5Q8IXB3 177 aa13.67□□□□□ -0.22
DDX56-202ENST00000415758 CDRT4Q8N9R6 151 aa13.67□□□□□ -0.22
DDX56-202ENST00000415758 OR6Y1Q8NGX8 325 aa13.67□□□□□ -0.22
DDX56-202ENST00000415758 CEP70Q8NHQ1 597 aa13.67□□□□□ -0.22
DDX56-202ENST00000415758 CDC26Q8NHZ8 85 aa13.67□□□□□ -0.22
DDX56-202ENST00000415758 ZNF764Q96H86 408 aaPredicted RBP13.67□□□□□ -0.22
DDX56-202ENST00000415758 REXO5Q96IC2 774 aaKnown RBP13.67□□□□□ -0.22
DDX56-202ENST00000415758 METTL2AQ96IZ6 378 aaKnown RBP13.67□□□□□ -0.22
DDX56-202ENST00000415758 HS6ST2Q96MM7 605 aa13.67□□□□□ -0.22
DDX56-202ENST00000415758 KCNA7Q96RP8 456 aa13.67□□□□□ -0.22
DDX56-202ENST00000415758 KLHDC3Q9BQ90 382 aa13.67□□□□□ -0.22
DDX56-202ENST00000415758 RHNO1Q9BSD3 238 aa13.67□□□□□ -0.22
DDX56-202ENST00000415758 POTEKPQ9BYX7 375 aa13.67□□□□□ -0.22
DDX56-202ENST00000415758 TMEM185BQ9H7F4 350 aa13.67□□□□□ -0.22
DDX56-202ENST00000415758 UBQLN4Q9NRR5 601 aa13.67□□□□□ -0.22
DDX56-202ENST00000415758 CISD1Q9NZ45 108 aaKnown RBP13.67□□□□□ -0.22
DDX56-202ENST00000415758 GDF2Q9UK05 429 aaPredicted RBP13.67□□□□□ -0.22
DDX56-202ENST00000415758 PYCARDQ9ULZ3 195 aa13.67□□□□□ -0.22
DDX56-202ENST00000415758 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.66□□□□□ -0.22
DDX56-202ENST00000415758 ZNF814B7Z6K7 855 aa13.66□□□□□ -0.22
DDX56-202ENST00000415758 EFNA2O43921 213 aa13.66□□□□□ -0.22
DDX56-202ENST00000415758 PRKD3O94806 890 aa13.66□□□□□ -0.22
DDX56-202ENST00000415758 KCNK2O95069 426 aa13.66□□□□□ -0.22
DDX56-202ENST00000415758 ADAP00813 363 aa13.66□□□□□ -0.22
DDX56-202ENST00000415758 YES1P07947 543 aa13.66□□□□□ -0.22
DDX56-202ENST00000415758 ELK4P28324 431 aa13.66□□□□□ -0.22
DDX56-202ENST00000415758 FOXA1P55317 472 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms