RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 RNF115Q9Y4L5 304 aa17.25■□□□□ 0.35
UBXN4-202ENST00000415164 RAI1Q7Z5J4 1906 aaPredicted RBP17.25■□□□□ 0.35
UBXN4-202ENST00000415164 HEATR5AQ86XA9 2040 aa17.25■□□□□ 0.35
UBXN4-202ENST00000415164 USF3Q68DE3 2245 aa17.24■□□□□ 0.35
UBXN4-202ENST00000415164 SCDO00767 359 aa17.24■□□□□ 0.35
UBXN4-202ENST00000415164 CRLF1O75462 422 aa17.24■□□□□ 0.35
UBXN4-202ENST00000415164 NKX2-2O95096 273 aa17.24■□□□□ 0.35
UBXN4-202ENST00000415164 ACP2P11117 423 aa17.24■□□□□ 0.35
UBXN4-202ENST00000415164 PAX1P15863 534 aa17.24■□□□□ 0.35
UBXN4-202ENST00000415164 EFNA1P20827 205 aaPredicted RBP17.24■□□□□ 0.35
UBXN4-202ENST00000415164 MANFP55145 182 aaKnown RBP17.24■□□□□ 0.35
UBXN4-202ENST00000415164 CARD18P57730 90 aa17.24■□□□□ 0.35
UBXN4-202ENST00000415164 FAPQ12884 760 aa17.24■□□□□ 0.35
UBXN4-202ENST00000415164 CCNJQ5T5M9 372 aa17.24■□□□□ 0.35
UBXN4-202ENST00000415164 ZAR1Q86SH2 424 aa17.24■□□□□ 0.35
UBXN4-202ENST00000415164 LILRA2Q8N149 483 aa17.24■□□□□ 0.35
UBXN4-202ENST00000415164 COX18Q8N8Q8 333 aa17.24■□□□□ 0.35
UBXN4-202ENST00000415164 CDRT4Q8N9R6 151 aa17.24■□□□□ 0.35
UBXN4-202ENST00000415164 CCDC63Q8NA47 563 aa17.24■□□□□ 0.35
UBXN4-202ENST00000415164 CEP70Q8NHQ1 597 aa17.24■□□□□ 0.35
UBXN4-202ENST00000415164 B4GALNT2Q8NHY0 566 aa17.24■□□□□ 0.35
UBXN4-202ENST00000415164 ABHD3Q8WU67 409 aa17.24■□□□□ 0.35
UBXN4-202ENST00000415164 FBXW5Q969U6 566 aa17.24■□□□□ 0.35
UBXN4-202ENST00000415164 PPCDCQ96CD2 204 aa17.24■□□□□ 0.35
UBXN4-202ENST00000415164 KLHL15Q96M94 604 aa17.24■□□□□ 0.35
UBXN4-202ENST00000415164 FBXO34Q9NWN3 711 aa17.24■□□□□ 0.35
UBXN4-202ENST00000415164 WBP11Q9Y2W2 641 aaKnown RBP17.24■□□□□ 0.35
UBXN4-202ENST00000415164 PTGDR2Q9Y5Y4 395 aa17.24■□□□□ 0.35
UBXN4-202ENST00000415164 ROS1P08922 2347 aa17.23■□□□□ 0.35
UBXN4-202ENST00000415164 ADAMDEC1O15204 470 aa17.23■□□□□ 0.35
UBXN4-202ENST00000415164 KCNK2O95069 426 aa17.23■□□□□ 0.35
UBXN4-202ENST00000415164 CD3EP07766 207 aa17.23■□□□□ 0.35
UBXN4-202ENST00000415164 ALOX5P09917 674 aa17.23■□□□□ 0.35
UBXN4-202ENST00000415164 PSMB1P20618 241 aaKnown RBP17.23■□□□□ 0.35
UBXN4-202ENST00000415164 IL11P20809 199 aa17.23■□□□□ 0.35
UBXN4-202ENST00000415164 PRIM2P49643 509 aa17.23■□□□□ 0.35
UBXN4-202ENST00000415164 FOXF1Q12946 379 aa17.23■□□□□ 0.35
UBXN4-202ENST00000415164 ZNF385BQ569K4 471 aa17.23■□□□□ 0.35
UBXN4-202ENST00000415164 CLEC6AQ6EIG7 209 aa17.23■□□□□ 0.35
UBXN4-202ENST00000415164 SLC16A11Q8NCK7 471 aa17.23■□□□□ 0.35
UBXN4-202ENST00000415164 SPATA3Q8NHX4 192 aa17.23■□□□□ 0.35
UBXN4-202ENST00000415164 POC1BQ8TC44 478 aa17.23■□□□□ 0.35
UBXN4-202ENST00000415164 NEUROG1Q92886 237 aa17.23■□□□□ 0.35
UBXN4-202ENST00000415164 CCDC126Q96EE4 140 aa17.23■□□□□ 0.35
UBXN4-202ENST00000415164 C16orf58Q96GQ5 468 aa17.23■□□□□ 0.35
UBXN4-202ENST00000415164 MS4A4EQ96PG1 132 aa17.23■□□□□ 0.35
UBXN4-202ENST00000415164 TSSK3Q96PN8 268 aa17.23■□□□□ 0.35
UBXN4-202ENST00000415164 KLHDC3Q9BQ90 382 aa17.23■□□□□ 0.35
UBXN4-202ENST00000415164 TMEM204Q9BSN7 226 aa17.23■□□□□ 0.35
UBXN4-202ENST00000415164 HHATLQ9HCP6 504 aa17.23■□□□□ 0.35
UBXN4-202ENST00000415164 GIN1Q9NXP7 522 aa17.23■□□□□ 0.35
UBXN4-202ENST00000415164 PSMC3IPQ9P2W1 217 aaPredicted RBP17.23■□□□□ 0.35
UBXN4-202ENST00000415164 PCNX3Q9H6A9 2034 aa17.23■□□□□ 0.35
UBXN4-202ENST00000415164 A0A1W2PP18 115 aa17.22■□□□□ 0.35
UBXN4-202ENST00000415164 TMCC2O75069 709 aa17.22■□□□□ 0.35
UBXN4-202ENST00000415164 ABHD2P08910 425 aa17.22■□□□□ 0.35
UBXN4-202ENST00000415164 PABPC4LP0CB38 370 aaKnown RBP17.22■□□□□ 0.35
UBXN4-202ENST00000415164 SHC1P29353 583 aa17.22■□□□□ 0.35
UBXN4-202ENST00000415164 IDUAP35475 653 aa17.22■□□□□ 0.35
UBXN4-202ENST00000415164 DUSP5Q16690 384 aa17.22■□□□□ 0.35
UBXN4-202ENST00000415164 ZYG11AQ6WRX3 759 aa17.22■□□□□ 0.35
UBXN4-202ENST00000415164 NUFIP2Q7Z417 695 aaKnown RBP17.22■□□□□ 0.35
UBXN4-202ENST00000415164 TRIM46Q7Z4K8 759 aa17.22■□□□□ 0.35
UBXN4-202ENST00000415164 TUSC5Q8IXB3 177 aa17.22■□□□□ 0.35
UBXN4-202ENST00000415164 BANPQ8N9N5 519 aa17.22■□□□□ 0.35
UBXN4-202ENST00000415164 OR6Y1Q8NGX8 325 aa17.22■□□□□ 0.35
UBXN4-202ENST00000415164 PHOSPHO1Q8TCT1 267 aa17.22■□□□□ 0.35
UBXN4-202ENST00000415164 ACMSDQ8TDX5 336 aa17.22■□□□□ 0.35
UBXN4-202ENST00000415164 ZBED6CLQ96FA7 236 aaPredicted RBP17.22■□□□□ 0.35
UBXN4-202ENST00000415164 OR10A4Q9H209 315 aa17.22■□□□□ 0.35
UBXN4-202ENST00000415164 ESRP2Q9H6T0 727 aaKnown RBP17.22■□□□□ 0.35
UBXN4-202ENST00000415164 LRTM1Q9HBL6 345 aa17.22■□□□□ 0.35
UBXN4-202ENST00000415164 TNFRSF12AQ9NP84 129 aa17.22■□□□□ 0.35
UBXN4-202ENST00000415164 NGBQ9NPG2 151 aa17.22■□□□□ 0.35
UBXN4-202ENST00000415164 TIGARQ9NQ88 270 aa17.22■□□□□ 0.35
UBXN4-202ENST00000415164 DCDC2Q9UHG0 476 aa17.22■□□□□ 0.35
UBXN4-202ENST00000415164 MAGED1Q9Y5V3 778 aaPredicted RBP17.22■□□□□ 0.35
UBXN4-202ENST00000415164 G3V2L1 256 aa17.21■□□□□ 0.35
UBXN4-202ENST00000415164 RIPK2O43353 540 aa17.21■□□□□ 0.35
UBXN4-202ENST00000415164 RGS14O43566 566 aa17.21■□□□□ 0.35
UBXN4-202ENST00000415164 ADAP00813 363 aa17.21■□□□□ 0.35
UBXN4-202ENST00000415164 SOD3P08294 240 aa17.21■□□□□ 0.35
UBXN4-202ENST00000415164 UROSP10746 265 aa17.21■□□□□ 0.35
UBXN4-202ENST00000415164 PSMA4P25789 261 aaKnown RBP17.21■□□□□ 0.35
UBXN4-202ENST00000415164 KRTAP1-1Q07627 177 aa17.21■□□□□ 0.35
UBXN4-202ENST00000415164 CD226Q15762 336 aa17.21■□□□□ 0.35
UBXN4-202ENST00000415164 STK11Q15831 433 aa17.21■□□□□ 0.35
UBXN4-202ENST00000415164 ZNF239Q16600 458 aaKnown RBP17.21■□□□□ 0.35
UBXN4-202ENST00000415164 HMBOX1Q6NT76 420 aa17.21■□□□□ 0.35
UBXN4-202ENST00000415164 TFAP2EQ6VUC0 442 aa17.21■□□□□ 0.35
UBXN4-202ENST00000415164 FRMD7Q6ZUT3 714 aa17.21■□□□□ 0.35
UBXN4-202ENST00000415164 ATG4DQ86TL0 474 aaPredicted RBP17.21■□□□□ 0.35
UBXN4-202ENST00000415164 TRABD2AQ86V40 505 aa17.21■□□□□ 0.35
UBXN4-202ENST00000415164 MISPQ8IVT2 679 aa17.21■□□□□ 0.35
UBXN4-202ENST00000415164 MNS1Q8NEH6 495 aa17.21■□□□□ 0.35
UBXN4-202ENST00000415164 KBTBD8Q8NFY9 601 aa17.21■□□□□ 0.35
UBXN4-202ENST00000415164 ACTRT2Q8TDY3 377 aa17.21■□□□□ 0.35
UBXN4-202ENST00000415164 SMAP2Q8WU79 429 aaPredicted RBP17.21■□□□□ 0.35
UBXN4-202ENST00000415164 SRXN1Q9BYN0 137 aa17.21■□□□□ 0.35
UBXN4-202ENST00000415164 REG4Q9BYZ8 158 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms