RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 HCRTR2O43614 444 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 NUDT14O95848 222 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 AGR2O95994 175 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 IL18BPO95998 194 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 AK1P00568 194 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 ALDOCP09972 364 aaKnown RBP10.13□□□□□ -0.79
RFFL-204ENST00000414419 IDO1P14902 403 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 PEX19P40855 299 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 AGFG1P52594 562 aaKnown RBP10.13□□□□□ -0.79
RFFL-204ENST00000414419 ATP12AP54707 1039 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 B3GALT5-AS1P59052 145 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 UFM1P61960 85 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 RPS26P62854 115 aaKnown RBP10.13□□□□□ -0.79
RFFL-204ENST00000414419 EEF1A1P68104 462 aaKnown RBP10.13□□□□□ -0.79
RFFL-204ENST00000414419 OCRLQ01968 901 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 TLE4Q04727 773 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 LRRC74AQ0VAA2 488 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 SGCBQ16585 318 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 EEF1A1P5Q5VTE0 462 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 DMRTC2Q8IXT2 367 aaPredicted RBP10.13□□□□□ -0.79
RFFL-204ENST00000414419 CLEC4FQ8N1N0 589 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 C9orf106Q8NAJ2 232 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 GLB1L3Q8NCI6 653 aaPredicted RBP10.13□□□□□ -0.79
RFFL-204ENST00000414419 OR5D16Q8NGK9 328 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 B4GALNT2Q8NHY0 566 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 ACTRT2Q8TDY3 377 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 ZBTB8AQ96BR9 441 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 C14orf79Q96F83 325 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 OR52E6Q96RD3 313 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 UCN2Q96RP3 112 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 ZNF559Q9BR84 538 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 FOXD3Q9UJU5 478 aaPredicted RBP10.13□□□□□ -0.79
RFFL-204ENST00000414419 AP4B1Q9Y6B7 739 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 KCNE3Q9Y6H6 103 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 APCP25054 2843 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 NPIPA5A0A0B4J1W7 369 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 SLC22A20A6NK97 555 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 EEF1E1-BLOC1S5C9J1V9 151 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 NPIPA7E9PJI5 369 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 SYT5O00445 386 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 EEF1E1O43324 174 aaKnown RBP10.12□□□□□ -0.79
RFFL-204ENST00000414419 DIAPH2O60879 1101 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 SCN2BO60939 215 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 STX11O75558 287 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 SLC22A3O75751 556 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 RCBTB2O95199 551 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 PGRP06401 933 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 NPIPA8P0DM63 369 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 ZNF17P17021 662 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 IGFBP2P18065 325 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 ME2P23368 584 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 ANXA11P50995 505 aaKnown RBP10.12□□□□□ -0.79
RFFL-204ENST00000414419 CASP9P55211 416 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 GPR68Q15743 365 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 GSTA3Q16772 222 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 SLC9B1Q4ZJI4 515 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 OR2A2Q6IF42 318 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 PPP4R4Q6NUP7 873 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 ARSKQ6UWY0 536 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 ADGRE4PQ86SQ3 457 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 ZNF295-AS1Q8N0V1 137 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 ACBD4Q8NC06 268 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 RELL2Q8NC24 303 aaPredicted RBP10.12□□□□□ -0.79
RFFL-204ENST00000414419 XAGE5Q8WWM1 108 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 RNASE6Q93091 150 aaKnown RBP10.12□□□□□ -0.79
RFFL-204ENST00000414419 INTS12Q96CB8 462 aaKnown RBP10.12□□□□□ -0.79
RFFL-204ENST00000414419 PANX1Q96RD7 426 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 SDF2Q99470 211 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 TREX2Q9BQ50 279 aaPredicted RBP10.12□□□□□ -0.79
RFFL-204ENST00000414419 SLC35A5Q9BS91 424 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 SFXN3Q9BWM7 321 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 PINK1Q9BXM7 581 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 OR51I1Q9H343 314 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 CLCF1Q9UBD9 225 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 KCNN3Q9UGI6 736 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 BTNL2Q9UIR0 455 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 DTNAQ9Y4J8 743 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 GPR45Q9Y5Y3 372 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 DCHS2Q6V1P9 2916 aa10.12□□□□□ -0.79
RFFL-204ENST00000414419 HMGB1P1B2RPK0 211 aaPredicted RBP10.11□□□□□ -0.79
RFFL-204ENST00000414419 SHISA8B8ZZ34 492 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 UBDO15205 165 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 TNFRSF21O75509 655 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 IL6P05231 212 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 OR12D1P0DN82 309 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 EIF1P41567 113 aaKnown RBP10.11□□□□□ -0.79
RFFL-204ENST00000414419 KIR2DL3P43628 341 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 CPA2P48052 419 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 KHKP50053 298 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 P2RX1P51575 399 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 PHC1P78364 1004 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 HPCAP84074 193 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 CD226Q15762 336 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 ARHGAP11BQ3KRB8 267 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 PDCD4Q53EL6 469 aaKnown RBP10.11□□□□□ -0.79
RFFL-204ENST00000414419 KLHL26Q53HC5 615 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 TTMPQ5BVD1 217 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 SAXO2Q658L1 398 aa10.11□□□□□ -0.79
RFFL-204ENST00000414419 TNFAIP8L2Q6P589 184 aaPredicted RBP10.11□□□□□ -0.79
RFFL-204ENST00000414419 PLXDC2Q6UX71 529 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms