RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 RAB27BO00194 218 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 SLC28A1O00337 649 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 KPNA4O00629 521 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 PDXKO00764 312 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 TRAFD1O14545 582 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 RFXANKO14593 260 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 CDIPTO14735 213 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 PHYHO14832 338 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 NBR2O15453 112 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 XRCC2O43543 280 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 KLRC4O43908 158 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 TIMM8AO60220 97 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 KIAA0513O60268 411 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 OR10H2O60403 315 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 FCGR3BO75015 233 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 ENTPD5O75356 428 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 POP7O75817 140 aaKnown RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 PSMG1O95456 288 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 FAM107AO95990 144 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 MOCS2O96007 188 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 ACTL6AO96019 429 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 FGGP02679 453 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 TFP02787 698 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 CD5P06127 495 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 HOXD4P09016 255 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 SNHG28P0DPA3 235 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 PIM1P11309 404 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 CETPP11597 493 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 UCHL3P15374 230 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 ST6GAL1P15907 406 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 SPI1P17947 270 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 PGAM1P18669 254 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 CSNK2A2P19784 350 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 NPR2P20594 1047 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 BMP5P22003 454 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 UQCRC2P22695 453 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 PAX6P26367 422 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 STOMP27105 288 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 CFHR2P36980 270 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 PBX1P40424 430 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 MATKP42679 507 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 IER3P46695 156 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 RPL5P46777 297 aaKnown RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 FMO5P49326 533 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 MVDP53602 400 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 HSPA2P54652 639 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 F2RL1P55085 397 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 ERVK-8P63133 956 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 IRX4P78413 519 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 ADORA2A-AS1P86434 159 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 MBTD1Q05BQ5 628 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 CKAP4Q07065 602 aaKnown RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 AESQ08117 197 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 PUDPQ08623 228 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 DBPQ10586 325 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 BST2Q10589 180 aaKnown RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 ORC2Q13416 577 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 APOFQ13790 326 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 ARHGEF7Q14155 803 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 TFDP2Q14188 446 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 MESDQ14696 234 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 GPNMBQ14956 572 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 ACOX1Q15067 660 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 OR4D1Q15615 310 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 TRIP10Q15642 601 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 TRIP13Q15645 432 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 NPY5RQ15761 445 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 GRK1Q15835 563 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 CCDC6Q16204 474 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 NDUFA9Q16795 377 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 MEP1AQ16819 746 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 KNOP1Q1ED39 458 aaKnown RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 RNF212Q495C1 297 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 MIIPQ5JXC2 388 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF569Q5MCW4 686 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 CATSPEREQ5SY80 951 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 SPOUT1Q5T280 376 aaKnown RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 N4BP2L1Q5TBK1 243 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 TRIQKQ629K1 86 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 TMEM211Q6ICI0 200 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 RWDD4Q6NW29 188 aaKnown RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 NIPAL3Q6P499 406 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 DNM1P34Q6PK57 102 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 FAM159AQ6UWV7 190 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 ZDHHC24Q6UX98 284 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 RBMS3Q6XE24 437 aaKnown RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 DEF8Q6ZN54 512 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 GADL1Q6ZQY3 521 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 FCRLAQ7L513 359 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 TMED4Q7Z7H5 227 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 TMEM135Q86UB9 458 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 XYLT1Q86Y38 959 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 NRMQ8IXM6 262 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 LGI2Q8N0V4 545 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 OR4N4Q8N0Y3 316 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 EID3Q8N140 333 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 SYS1Q8N2H4 156 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 PELI3Q8N2H9 469 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 HORMAD2Q8N7B1 307 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms