RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 DNAJB13P59910 316 aa21.75■■□□□ 1.07
AC005540.1-201ENST00000413911 KRTAP1-1Q07627 177 aa21.75■■□□□ 1.07
AC005540.1-201ENST00000413911 CLHC1Q8NHS4 586 aa21.75■■□□□ 1.07
AC005540.1-201ENST00000413911 RAB3IL1Q8TBN0 382 aa21.75■■□□□ 1.07
AC005540.1-201ENST00000413911 ACTRT2Q8TDY3 377 aa21.75■■□□□ 1.07
AC005540.1-201ENST00000413911 TMEM171Q8WVE6 324 aa21.75■■□□□ 1.07
AC005540.1-201ENST00000413911 ZBTB8AQ96BR9 441 aa21.75■■□□□ 1.07
AC005540.1-201ENST00000413911 ZNF764Q96H86 408 aaPredicted RBP21.75■■□□□ 1.07
AC005540.1-201ENST00000413911 C12orf49Q9H741 205 aa21.75■■□□□ 1.07
AC005540.1-201ENST00000413911 LRTM1Q9HBL6 345 aa21.75■■□□□ 1.07
AC005540.1-201ENST00000413911 C1orf109Q9NX04 203 aa21.75■■□□□ 1.07
AC005540.1-201ENST00000413911 BAIAP2L1Q9UHR4 511 aa21.75■■□□□ 1.07
AC005540.1-201ENST00000413911 COL6A5A8TX70 2615 aa21.75■■□□□ 1.07
AC005540.1-201ENST00000413911 HS3ST1O14792 307 aa21.74■■□□□ 1.07
AC005540.1-201ENST00000413911 EFNA2O43921 213 aa21.74■■□□□ 1.07
AC005540.1-201ENST00000413911 GLRA3O75311 464 aa21.74■■□□□ 1.07
AC005540.1-201ENST00000413911 NR1H2P55055 460 aa21.74■■□□□ 1.07
AC005540.1-201ENST00000413911 VPS26BQ4G0F5 336 aa21.74■■□□□ 1.07
AC005540.1-201ENST00000413911 CCNJQ5T5M9 372 aa21.74■■□□□ 1.07
AC005540.1-201ENST00000413911 HBMQ6B0K9 141 aa21.74■■□□□ 1.07
AC005540.1-201ENST00000413911 ESPNLQ6ZVH7 1005 aa21.74■■□□□ 1.07
AC005540.1-201ENST00000413911 ZNF611Q8N823 705 aa21.74■■□□□ 1.07
AC005540.1-201ENST00000413911 LILRB1Q8NHL6 650 aaPredicted RBP21.74■■□□□ 1.07
AC005540.1-201ENST00000413911 CEP70Q8NHQ1 597 aa21.74■■□□□ 1.07
AC005540.1-201ENST00000413911 ROBO4Q8WZ75 1007 aa21.74■■□□□ 1.07
AC005540.1-201ENST00000413911 OSTF1Q92882 214 aa21.74■■□□□ 1.07
AC005540.1-201ENST00000413911 METTL2AQ96IZ6 378 aaKnown RBP21.74■■□□□ 1.07
AC005540.1-201ENST00000413911 TSSK3Q96PN8 268 aa21.74■■□□□ 1.07
AC005540.1-201ENST00000413911 TUBB1Q9H4B7 451 aa21.74■■□□□ 1.07
AC005540.1-201ENST00000413911 REEP4Q9H6H4 257 aa21.74■■□□□ 1.07
AC005540.1-201ENST00000413911 OXSMQ9NWU1 459 aa21.74■■□□□ 1.07
AC005540.1-201ENST00000413911 PAQR5Q9NXK6 330 aaPredicted RBP21.74■■□□□ 1.07
AC005540.1-201ENST00000413911 STOML1Q9UBI4 398 aa21.74■■□□□ 1.07
AC005540.1-201ENST00000413911 ATRQ13535 2644 aa21.74■■□□□ 1.07
AC005540.1-201ENST00000413911 UQCRHLA0A096LP55 91 aa21.73■■□□□ 1.07
AC005540.1-201ENST00000413911 TBX19O60806 448 aa21.73■■□□□ 1.07
AC005540.1-201ENST00000413911 SYNGR4O95473 234 aa21.73■■□□□ 1.07
AC005540.1-201ENST00000413911 LINGO3P0C6S8 592 aa21.73■■□□□ 1.07
AC005540.1-201ENST00000413911 PSMB1P20618 241 aaKnown RBP21.73■■□□□ 1.07
AC005540.1-201ENST00000413911 PRIM2P49643 509 aa21.73■■□□□ 1.07
AC005540.1-201ENST00000413911 MANFP55145 182 aaKnown RBP21.73■■□□□ 1.07
AC005540.1-201ENST00000413911 PDE7AQ13946 482 aa21.73■■□□□ 1.07
AC005540.1-201ENST00000413911 TSC22D1Q15714 1073 aa21.73■■□□□ 1.07
AC005540.1-201ENST00000413911 RFTN2Q52LD8 501 aaPredicted RBP21.73■■□□□ 1.07
AC005540.1-201ENST00000413911 BEND4Q6ZU67 534 aa21.73■■□□□ 1.07
AC005540.1-201ENST00000413911 SZRD1Q7Z422 152 aa21.73■■□□□ 1.07
AC005540.1-201ENST00000413911 CEP112Q8N8E3 955 aa21.73■■□□□ 1.07
AC005540.1-201ENST00000413911 AKAP1Q92667 903 aaKnown RBP eCLIP21.73■■□□□ 1.07
AC005540.1-201ENST00000413911 PPCDCQ96CD2 204 aa21.73■■□□□ 1.07
AC005540.1-201ENST00000413911 MS4A4EQ96PG1 132 aa21.73■■□□□ 1.07
AC005540.1-201ENST00000413911 CCT7Q99832 543 aa21.73■■□□□ 1.07
AC005540.1-201ENST00000413911 GLRX2Q9NS18 164 aa21.73■■□□□ 1.07
AC005540.1-201ENST00000413911 GPR52Q9Y2T5 361 aa21.73■■□□□ 1.07
AC005540.1-201ENST00000413911 H3BQF6 201 aa21.72■■□□□ 1.07
AC005540.1-201ENST00000413911 OIP5O43482 229 aa21.72■■□□□ 1.07
AC005540.1-201ENST00000413911 GCM2O75603 506 aaPredicted RBP21.72■■□□□ 1.07
AC005540.1-201ENST00000413911 RNF144AP50876 292 aaPredicted RBP21.72■■□□□ 1.07
AC005540.1-201ENST00000413911 ZNF41P51814 821 aaPredicted RBP21.72■■□□□ 1.07
AC005540.1-201ENST00000413911 ATP5J2P56134 94 aa21.72■■□□□ 1.07
AC005540.1-201ENST00000413911 TNK1Q13470 666 aa21.72■■□□□ 1.07
AC005540.1-201ENST00000413911 CFAP157Q5JU67 520 aa21.72■■□□□ 1.07
AC005540.1-201ENST00000413911 ALKBH2Q6NS38 261 aa21.72■■□□□ 1.07
AC005540.1-201ENST00000413911 NUFIP2Q7Z417 695 aaKnown RBP21.72■■□□□ 1.07
AC005540.1-201ENST00000413911 LILRA2Q8N149 483 aa21.72■■□□□ 1.07
AC005540.1-201ENST00000413911 OR6Y1Q8NGX8 325 aa21.72■■□□□ 1.07
AC005540.1-201ENST00000413911 ABHD3Q8WU67 409 aa21.72■■□□□ 1.07
AC005540.1-201ENST00000413911 S100PBPQ96BU1 408 aa21.72■■□□□ 1.07
AC005540.1-201ENST00000413911 ZNF524Q96C55 264 aa21.72■■□□□ 1.07
AC005540.1-201ENST00000413911 ZBED6CLQ96FA7 236 aaPredicted RBP21.72■■□□□ 1.07
AC005540.1-201ENST00000413911 SRXN1Q9BYN0 137 aa21.72■■□□□ 1.07
AC005540.1-201ENST00000413911 UBQLN4Q9NRR5 601 aa21.72■■□□□ 1.07
AC005540.1-201ENST00000413911 SIRT3Q9NTG7 399 aaPredicted RBP21.72■■□□□ 1.07
AC005540.1-201ENST00000413911 SH3BP4Q9P0V3 963 aa21.72■■□□□ 1.07
AC005540.1-201ENST00000413911 SONP18583 2426 aaKnown RBP21.72■■□□□ 1.07
AC005540.1-201ENST00000413911 SLC28A1O00337 649 aa21.71■■□□□ 1.07
AC005540.1-201ENST00000413911 SOX30O94993 753 aa21.71■■□□□ 1.07
AC005540.1-201ENST00000413911 SFTPDP35247 375 aa21.71■■□□□ 1.07
AC005540.1-201ENST00000413911 NAA20P61599 178 aa21.71■■□□□ 1.07
AC005540.1-201ENST00000413911 ATG4DQ86TL0 474 aaPredicted RBP21.71■■□□□ 1.07
AC005540.1-201ENST00000413911 TRABD2AQ86V40 505 aa21.71■■□□□ 1.07
AC005540.1-201ENST00000413911 GABRG1Q8N1C3 465 aa21.71■■□□□ 1.07
AC005540.1-201ENST00000413911 B4GALNT2Q8NHY0 566 aa21.71■■□□□ 1.07
AC005540.1-201ENST00000413911 KLHL15Q96M94 604 aa21.71■■□□□ 1.07
AC005540.1-201ENST00000413911 OR10A4Q9H209 315 aa21.71■■□□□ 1.07
AC005540.1-201ENST00000413911 CXorf56Q9H5V9 222 aa21.71■■□□□ 1.07
AC005540.1-201ENST00000413911 ACSS1Q9NUB1 689 aaPredicted RBP21.71■■□□□ 1.07
AC005540.1-201ENST00000413911 LAMP3Q9UQV4 416 aa21.71■■□□□ 1.07
AC005540.1-201ENST00000413911 FIS1Q9Y3D6 152 aa21.71■■□□□ 1.07
AC005540.1-201ENST00000413911 FREM1Q5H8C1 2179 aa21.7■■□□□ 1.06
AC005540.1-201ENST00000413911 SHBGP04278 402 aa21.7■■□□□ 1.06
AC005540.1-201ENST00000413911 TUBBP07437 444 aa21.7■■□□□ 1.06
AC005540.1-201ENST00000413911 CPA3P15088 417 aa21.7■■□□□ 1.06
AC005540.1-201ENST00000413911 CRHR1P34998 444 aa21.7■■□□□ 1.06
AC005540.1-201ENST00000413911 CARD18P57730 90 aa21.7■■□□□ 1.06
AC005540.1-201ENST00000413911 RPL38P63173 70 aaKnown RBP21.7■■□□□ 1.06
AC005540.1-201ENST00000413911 PPP2R2BQ00005 443 aa21.7■■□□□ 1.06
AC005540.1-201ENST00000413911 ZNF117Q03924 483 aa21.7■■□□□ 1.06
AC005540.1-201ENST00000413911 FOXF1Q12946 379 aa21.7■■□□□ 1.06
AC005540.1-201ENST00000413911 ZNF239Q16600 458 aaKnown RBP21.7■■□□□ 1.06
AC005540.1-201ENST00000413911 CCDC153Q494R4 210 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms