RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 CARD8Q9Y2G2 431 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 DNAJC13O75165 2243 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 IGLV3-32A0A0A0MS00 114 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 PRSS51A0A1B0GVH4 220 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 ENO4A6NNW6 628 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 RNASET2O00584 256 aaKnown RBP9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 ANKRD28O15084 1053 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 FCMRO60667 390 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 SCN2BO60939 215 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 SNNO75324 88 aaPredicted RBP9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 SNUPNO95149 360 aaKnown RBP9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 NUDT14O95848 222 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 GSNP06396 782 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 KRT16P08779 473 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 IL11P20809 199 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 IL12AP29459 219 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 S100A3P33764 101 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 EIF1AXP47813 144 aaKnown RBP9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 CPA2P48052 419 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 ZNF41P51814 821 aaPredicted RBP9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 ATP12AP54707 1039 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 EEFSECP57772 596 aaKnown RBP9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 C21orf58P58505 322 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 ZNF117Q03924 483 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 PON3Q15166 354 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 TOMM34Q15785 309 aaPredicted RBP9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 FAM174BQ3ZCQ3 159 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 SLC9B1Q4ZJI4 515 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 KLHL26Q53HC5 615 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 ANXA8L1Q5VT79 327 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 TNFAIP8L2Q6P589 184 aaPredicted RBP9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 CBLN3Q6UW01 205 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 CAMKMTQ7Z624 323 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 VPS37AQ8NEZ2 397 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 FNDC9Q8TBE3 224 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 POC1BQ8TC44 478 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 SFXN5Q8TD22 340 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 XAGE5Q8WWM1 108 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 ZNF75CPQ92670 426 aaPredicted RBP9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 RAB8BQ92930 207 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 MOAP1Q96BY2 351 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 SLC35G5Q96KT7 338 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 RNF145Q96MT1 663 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 SDF2Q99470 211 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 GPATCH1Q9BRR8 931 aaKnown RBP9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 INPP5KQ9BT40 448 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 PRRG4Q9BZD6 226 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 OR51I1Q9H343 314 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 NEUROD4Q9HD90 331 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 KCNN3Q9UGI6 736 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 MKLN1Q9UL63 735 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 CLEC4AQ9UMR7 237 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 AP4B1Q9Y6B7 739 aa9.17□□□□□ -0.94
NCKIPSD-202ENST00000413374 A0A1W2PNV4 684 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 A0A1W2PQD3 144 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 TNFSF11O14788 317 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 HDAC3O15379 428 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 CXCL13O43927 109 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 TNFRSF21O75509 655 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 IL18BPO95998 194 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 NGFRP08138 427 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 UQCRC2P22695 453 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 LCN1P31025 176 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 CHI3L1P36222 383 aaPredicted RBP9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 CPOXP36551 454 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 SLC6A8P48029 635 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 RPS3AP61247 264 aaKnown RBP9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 TMEM44Q2T9K0 475 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 PLPPR5Q32ZL2 321 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 GLYR1Q49A26 553 aaPredicted RBP9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 VWA1Q6PCB0 445 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 BHLHB9Q6PI77 547 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 ZNF621Q6ZSS3 439 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 C16orf62Q7Z3J2 963 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 SPATA19Q7Z5L4 167 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 BTLAQ7Z6A9 289 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 KIRREL3Q8IZU9 778 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 ZNF527Q8NB42 609 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 OR8J2Q8NGG1 315 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 GOT1L1Q8NHS2 421 aaPredicted RBP9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 FBXO27Q8NI29 283 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 ZNF524Q96C55 264 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 STARD4Q96DR4 205 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 UCN2Q96RP3 112 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 SFXN3Q9BWM7 321 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 HOXD1Q9GZZ0 328 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 OPN3Q9H1Y3 402 aaPredicted RBP9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 AIG1Q9NVV5 245 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 DNAJB12Q9NXW2 375 aaKnown RBP9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 GPR45Q9Y5Y3 372 aa9.16□□□□□ -0.94
NCKIPSD-202ENST00000413374 FBN2P35556 2912 aa9.15□□□□□ -0.94
NCKIPSD-202ENST00000413374 A0A087WZY1 265 aa9.15□□□□□ -0.94
NCKIPSD-202ENST00000413374 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.15□□□□□ -0.94
NCKIPSD-202ENST00000413374 A0A0J9YW62 118 aa9.15□□□□□ -0.94
NCKIPSD-202ENST00000413374 CENPVL1A0A0U1RR11 272 aa9.15□□□□□ -0.94
NCKIPSD-202ENST00000413374 TUBAL3A6NHL2 446 aa9.15□□□□□ -0.94
NCKIPSD-202ENST00000413374 CCDC154A6NI56 674 aa9.15□□□□□ -0.94
NCKIPSD-202ENST00000413374 DUXAA6NLW8 204 aa9.15□□□□□ -0.94
NCKIPSD-202ENST00000413374 TRPC5OSA6NMA1 111 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms