RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 IRF7Q92985 503 aa5.3□□□□□ -1.56
CBX1P3-201ENST00000413296 TP53INP1Q96A56 240 aa5.3□□□□□ -1.56
CBX1P3-201ENST00000413296 ZNF419Q96HQ0 510 aaPredicted RBP5.3□□□□□ -1.56
CBX1P3-201ENST00000413296 OPALINQ96PE5 141 aa5.3□□□□□ -1.56
CBX1P3-201ENST00000413296 UHRF2Q96PU4 802 aa5.3□□□□□ -1.56
CBX1P3-201ENST00000413296 CSPG4P5Q96PW8 444 aa5.3□□□□□ -1.56
CBX1P3-201ENST00000413296 IRX2Q9BZI1 471 aaPredicted RBP5.3□□□□□ -1.56
CBX1P3-201ENST00000413296 SRRQ9GZT4 340 aa5.3□□□□□ -1.56
CBX1P3-201ENST00000413296 EGLN3Q9H6Z9 239 aa5.3□□□□□ -1.56
CBX1P3-201ENST00000413296 MSL2Q9HCI7 577 aa5.3□□□□□ -1.56
CBX1P3-201ENST00000413296 MIOSQ9NXC5 875 aa5.3□□□□□ -1.56
CBX1P3-201ENST00000413296 ABCD2Q9UBJ2 740 aa5.3□□□□□ -1.56
CBX1P3-201ENST00000413296 XRN1Q8IZH2 1706 aaKnown RBP5.3□□□□□ -1.56
CBX1P3-201ENST00000413296 GOLGA6L4A6NEF3 574 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 MKRN2OSH3BPM6 223 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 OR7A17O14581 309 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 RRHO14718 337 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 AIREO43918 545 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 GPR137BO60478 399 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 GMDSO60547 372 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 CDC14BO60729 498 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 PAPSS2O95340 614 aaPredicted RBP5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 BRI3O95415 125 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 TGFB1P01137 390 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 IGLV1-40P01703 118 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 GAPDHP04406 335 aaKnown RBP5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 DCNP07585 359 aaKnown RBP5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 ARSBP15848 533 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 PMCHP20382 165 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 TBXA2RP21731 343 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 IGFBP6P24592 240 aaPredicted RBP5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 BDKRB2P30411 391 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 HPCAL1P37235 193 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 PSMD7P51665 324 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 EFNB2P52799 333 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 C1QTNF8P60827 252 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 RAB10P61026 200 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 SRSF3P84103 164 aaKnown RBP5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 EWSR1Q01844 656 aaKnown RBP eCLIP5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 CDR2Q01850 454 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 C1orf61Q13536 156 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 VPS26BQ4G0F5 336 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 KHDRBS2Q5VWX1 349 aaKnown RBP5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 ZNF776Q68DI1 518 aaPredicted RBP5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 ZNF546Q86UE3 836 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 RANBP3LQ86VV4 465 aaPredicted RBP5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 CACUL1Q86Y37 369 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 PALB2Q86YC2 1186 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 MARCH9Q86YJ5 346 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 ERI1Q8IV48 349 aaKnown RBP5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 NPAS3Q8IXF0 933 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 KBTBD2Q8IY47 623 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 HORMAD2Q8N7B1 307 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 INO80EQ8NBZ0 244 aaPredicted RBP5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 NECAP1Q8NC96 275 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 CCDC197Q8NCU1 140 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 ZNF680Q8NEM1 530 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 NUBPLQ8TB37 319 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 LRRC15Q8TF66 581 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 FCAMRQ8WWV6 532 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 ACOT11Q8WXI4 607 aaPredicted RBP5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 PPP1R36Q96LQ0 422 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 JSRP1Q96MG2 331 aaPredicted RBP5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 ZNF251Q9BRH9 671 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 GPR174Q9BXC1 333 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 VIPAS39Q9H9C1 493 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 ZNF701Q9NV72 531 aaPredicted RBP5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 ASIC5Q9NY37 505 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 STMN3Q9NZ72 180 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 FZR1Q9UM11 496 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 KLHDC2Q9Y2U9 406 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 CHST2Q9Y4C5 530 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 YIPF1Q9Y548 306 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 OR1A2Q9Y585 309 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 COLEC10Q9Y6Z7 277 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 KAT6AQ92794 2004 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 COL22A1Q8NFW1 1626 aaPredicted RBP5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 TNS3Q68CZ2 1445 aa5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 RPAP1Q9BWH6 1393 aaPredicted RBP5.29□□□□□ -1.56
CBX1P3-201ENST00000413296 CROCC2H7BZ55 1655 aa5.28□□□□□ -1.56
CBX1P3-201ENST00000413296 GCC2Q8IWJ2 1684 aa5.28□□□□□ -1.56
CBX1P3-201ENST00000413296 A0A1W2PNV4 684 aa5.28□□□□□ -1.56
CBX1P3-201ENST00000413296 MED19A0JLT2 244 aaPredicted RBP5.28□□□□□ -1.56
CBX1P3-201ENST00000413296 BCLAF3A2AJT9 711 aaKnown RBP5.28□□□□□ -1.56
CBX1P3-201ENST00000413296 LRP5LA4QPB2 252 aa5.28□□□□□ -1.56
CBX1P3-201ENST00000413296 E7EWF7 191 aa5.28□□□□□ -1.56
CBX1P3-201ENST00000413296 TULP2O00295 520 aa5.28□□□□□ -1.56
CBX1P3-201ENST00000413296 ARPC2O15144 300 aa5.28□□□□□ -1.56
CBX1P3-201ENST00000413296 MID1O15344 667 aa5.28□□□□□ -1.56
CBX1P3-201ENST00000413296 GSC2O15499 205 aa5.28□□□□□ -1.56
CBX1P3-201ENST00000413296 EMC8O43402 210 aa5.28□□□□□ -1.56
CBX1P3-201ENST00000413296 SNAI2O43623 268 aa5.28□□□□□ -1.56
CBX1P3-201ENST00000413296 AP2A2O94973 939 aa5.28□□□□□ -1.56
CBX1P3-201ENST00000413296 OAZ2O95190 189 aa5.28□□□□□ -1.56
CBX1P3-201ENST00000413296 VAPBO95292 243 aa5.28□□□□□ -1.56
CBX1P3-201ENST00000413296 IFNA6P05013 189 aa5.28□□□□□ -1.56
CBX1P3-201ENST00000413296 IL6P05231 212 aa5.28□□□□□ -1.56
CBX1P3-201ENST00000413296 ELFN1P0C7U0 828 aa5.28□□□□□ -1.56
CBX1P3-201ENST00000413296 MYL2P10916 166 aa5.28□□□□□ -1.56
CBX1P3-201ENST00000413296 PSKH1P11801 424 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms