RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 GALR2O43603 387 aaPredicted RBP7.96□□□□□ -1.13
SYNE1-211ENST00000413186 NADKO95544 446 aaPredicted RBP7.96□□□□□ -1.13
SYNE1-211ENST00000413186 POU2F1P14859 743 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 MYF6P23409 242 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 TLE1Q04724 770 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 EXOSC7Q15024 291 aaKnown RBP7.96□□□□□ -1.13
SYNE1-211ENST00000413186 TRIP6Q15654 476 aaKnown RBP7.96□□□□□ -1.13
SYNE1-211ENST00000413186 ZNF528Q3MIS6 628 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 IQCCQ4KMZ1 466 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 TMEM17Q86X19 198 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 LRRC17Q8N6Y2 441 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 STT3BQ8TCJ2 826 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 PNPLA2Q96AD5 504 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 TRNT1Q96Q11 434 aaKnown RBP7.96□□□□□ -1.13
SYNE1-211ENST00000413186 CPPED1Q9BRF8 314 aaPredicted RBP7.96□□□□□ -1.13
SYNE1-211ENST00000413186 ANKRD60Q9BZ19 345 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 OR10A5Q9H207 317 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 SACM1LQ9NTJ5 587 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 ENPP4Q9Y6X5 453 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 LOC100506127A0A0U1RQW1 187 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 A0A1W2PR48 441 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 LOC110117498-PIK3R3F6TDL0 507 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 OXSR1O95747 527 aaPredicted RBP7.96□□□□□ -1.13
SYNE1-211ENST00000413186 FADS2O95864 444 aaKnown RBP7.96□□□□□ -1.13
SYNE1-211ENST00000413186 IFI30P13284 250 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 SMSP52788 366 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 SELENOWP63302 87 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 ILKQ13418 452 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 COTL1Q14019 142 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 P4HA3Q7Z4N8 544 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.96□□□□□ -1.13
SYNE1-211ENST00000413186 GATSQ8NAP1 163 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 OR5J2Q8NH18 312 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 MCFD2Q8NI22 146 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 ELP4Q96EB1 424 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 TMEM68Q96MH6 324 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 BCL7BQ9BQE9 202 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 ATP13A2Q9NQ11 1180 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 SEMA4GQ9NTN9 838 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 VSTM2BA6NLU5 285 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 A8MV72 311 aaPredicted RBP7.96□□□□□ -1.14
SYNE1-211ENST00000413186 SGCEO43556 437 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 HCN1O60741 890 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 PLGP00747 810 aaPredicted RBP7.96□□□□□ -1.14
SYNE1-211ENST00000413186 PRH1P02810 166 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 BIDP55957 195 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 TIAL1Q01085 375 aaKnown RBP eCLIP7.96□□□□□ -1.14
SYNE1-211ENST00000413186 MFSD13AQ14CX5 517 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 MED22Q15528 200 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 ETFRF1Q6IPR1 90 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 GNPDA2Q8TDQ7 276 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 ZFP90Q8TF47 636 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 DNAJA4Q8WW22 397 aaPredicted RBP7.96□□□□□ -1.14
SYNE1-211ENST00000413186 SCARF2Q96GP6 870 aaPredicted RBP7.96□□□□□ -1.14
SYNE1-211ENST00000413186 CDADC1Q9BWV3 514 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 ZNF230Q9UIE0 474 aaPredicted RBP7.96□□□□□ -1.14
SYNE1-211ENST00000413186 MRPS7Q9Y2R9 242 aaKnown RBP7.96□□□□□ -1.14
SYNE1-211ENST00000413186 PCDHGA8Q9Y5G5 932 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 PEX16Q9Y5Y5 336 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 SZT2Q5T011 3432 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 PLXNA3P51805 1871 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 CDH23Q9H251 3354 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 TRAPPC13A5PLN9 417 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 EFCAB9A8MZ26 197 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 MEN1O00255 615 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 TMPRSS11DO60235 418 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 CHMP24386 653 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 GRK5P34947 590 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 SLCO6A1Q86UG4 719 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 CA13Q8N1Q1 262 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 DTWD1Q8N5C7 304 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 FBXO27Q8NI29 283 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 CREB3L4Q8TEY5 395 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 OSTF1Q92882 214 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 CDS1Q92903 461 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 MAL2Q969L2 176 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 LCORQ96JN0 433 aaPredicted RBP7.96□□□□□ -1.14
SYNE1-211ENST00000413186 RASSF1Q9NS23 344 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 PCDHGB1Q9Y5G3 927 aa7.96□□□□□ -1.14
SYNE1-211ENST00000413186 A0A1W2PR77 199 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 EME2A4GXA9 379 aaPredicted RBP7.95□□□□□ -1.14
SYNE1-211ENST00000413186 IDSB3KWA1 339 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 CLDN25C9JDP6 229 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 ANKRD28O15084 1053 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 OR6B1O95007 311 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 GIMD1P0DJR0 217 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 SLC6A6P31641 620 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 CA5AP35218 305 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 OR1E2P47887 323 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 HLCSP50747 726 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 TMBIM6P55061 237 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 MS4A2Q01362 244 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 FRMPD2BQ6IN97 320 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 FAM111BQ6SJ93 734 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 ISLR2Q6UXK2 745 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 BEND4Q6ZU67 534 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 OAFQ86UD1 273 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 SLC34A3Q8N130 599 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 AQP11Q8NBQ7 271 aa7.95□□□□□ -1.14
SYNE1-211ENST00000413186 GATA6Q92908 595 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms