RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 PTGDR2Q9Y5Y4 395 aa4.9□□□□□ -1.62
HERC4-205ENST00000412272 OAS3Q9Y6K5 1087 aaKnown RBP4.9□□□□□ -1.62
HERC4-205ENST00000412272 SSC5DA1L4H1 1573 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 A0A0G2JN53 185 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 A0A1B0GVI7 797 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 MYO1GB0I1T2 1018 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 SGK494L7N484 410 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 FLRT2O43155 660 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 TLX3O43711 291 aaPredicted RBP4.9□□□□□ -1.63
HERC4-205ENST00000412272 MTX2O75431 263 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 KAT7O95251 611 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 JCHAINP01591 159 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 SLC6A1P30531 599 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 MATKP42679 507 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 EMP2P54851 167 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 EMX2Q04743 252 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 MXD1Q05195 221 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 HNRNPA0Q13151 305 aaKnown RBP4.9□□□□□ -1.63
HERC4-205ENST00000412272 TIMM50Q3ZCQ8 353 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 AGKQ53H12 422 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 TXNRD3NBQ6F5E7 133 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 MRM1Q6IN84 353 aaKnown RBP4.9□□□□□ -1.63
HERC4-205ENST00000412272 UQCC3Q6UW78 93 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 OTOP2Q7RTS6 562 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 CCDC117Q8IWD4 279 aaPredicted RBP4.9□□□□□ -1.63
HERC4-205ENST00000412272 ADGRF3Q8IZF5 1079 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 ACOT11Q8WXI4 607 aaPredicted RBP4.9□□□□□ -1.63
HERC4-205ENST00000412272 FAM120BQ96EK7 910 aaKnown RBP4.9□□□□□ -1.63
HERC4-205ENST00000412272 P2RY11Q96G91 374 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 URM1Q9BTM9 101 aaKnown RBP4.9□□□□□ -1.63
HERC4-205ENST00000412272 TAPBPLQ9BX59 468 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 FN3KQ9H479 309 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 KIR3DX1Q9H7L2 352 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 ZMAT3Q9HA38 289 aaKnown RBP4.9□□□□□ -1.63
HERC4-205ENST00000412272 PGPEP1Q9NXJ5 209 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 RBPJLQ9UBG7 517 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 FBXL4Q9UKA2 621 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 FZD10Q9ULW2 581 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 GABRQQ9UN88 632 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 FBXO7Q9Y3I1 522 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 KCTD3Q9Y597 815 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 TSC2P49815 1807 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 COL4A1P02462 1669 aa4.9□□□□□ -1.63
HERC4-205ENST00000412272 ITGA5P08648 1049 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 ABOP16442 354 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 ITGB7P26010 798 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 STOMP27105 288 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 GSK3BP49841 420 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 CRISP1P54107 249 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 GCNT6Q5T4J0 391 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 ZNF774Q6NX45 483 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 DET1Q7L5Y6 550 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 TAF8Q7Z7C8 310 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 ZNF573Q86YE8 665 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 CFAP206Q8IYR0 622 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 HSD17B11Q8NBQ5 300 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 CNIH3Q8TBE1 160 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 CERS2Q96G23 380 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 APIPQ96GX9 242 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 SPATA5L1Q9BVQ7 753 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 ACE2Q9BYF1 805 aaPredicted RBP4.89□□□□□ -1.63
HERC4-205ENST00000412272 OR51E2Q9H255 320 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 FZD3Q9NPG1 666 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 DECR2Q9NUI1 292 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 OR14J1Q9UGF5 321 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 LEF1Q9UJU2 399 aaPredicted RBP4.89□□□□□ -1.63
HERC4-205ENST00000412272 BCS1LQ9Y276 419 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 BRCA1P38398 1863 aaKnown RBP4.89□□□□□ -1.63
HERC4-205ENST00000412272 PRAMEF33A0A0G2JMD5 474 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 TRBV11-1A0A0K0K1C0 115 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 PGPEP1LA6NFU8 196 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 SERPINE3A8MV23 424 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 MEIS2O14770 477 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 BCKDKO14874 412 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 CCL25O15444 150 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 TGOLN2O43493 480 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 PRAMEF10O60809 474 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 PPP1R11O60927 126 aaPredicted RBP4.89□□□□□ -1.63
HERC4-205ENST00000412272 ERAL1O75616 437 aaKnown RBP4.89□□□□□ -1.63
HERC4-205ENST00000412272 CD2P06729 351 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 SPARCP09486 303 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 SREBF1P36956 1147 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 EFNA3P52797 238 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 HLXQ14774 488 aaPredicted RBP4.89□□□□□ -1.63
HERC4-205ENST00000412272 ZBTB6Q15916 424 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 MESTQ5EB52 335 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 SH3PXD2AQ5TCZ1 1133 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 ZNF367Q7RTV3 350 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 CUZD1Q86UP6 607 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 PHYKPLQ8IUZ5 450 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 BAP18Q8IXM2 172 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 LYG1Q8N1E2 194 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 PXT1Q8NFP0 134 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 OTUB1Q96FW1 271 aaPredicted RBP4.89□□□□□ -1.63
HERC4-205ENST00000412272 MRGPRX3Q96LB0 322 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 MRPL57Q9BQC6 102 aaKnown RBP4.89□□□□□ -1.63
HERC4-205ENST00000412272 ELOVL1Q9BW60 279 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 OR52A5Q9H2C5 316 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 RAB6BQ9NRW1 208 aa4.89□□□□□ -1.63
HERC4-205ENST00000412272 ZCCHC3Q9NUD5 404 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms