RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 RFWD2Q8NHY2 731 aa10.44□□□□□ -0.74
LINC00963-201ENST00000412141 FAM110BQ8TC76 370 aa10.44□□□□□ -0.74
LINC00963-201ENST00000412141 PHOSPHO1Q8TCT1 267 aa10.44□□□□□ -0.74
LINC00963-201ENST00000412141 ADAMTS15Q8TE58 950 aa10.44□□□□□ -0.74
LINC00963-201ENST00000412141 HOXB13Q92826 284 aaPredicted RBP10.44□□□□□ -0.74
LINC00963-201ENST00000412141 RNF145Q96MT1 663 aa10.44□□□□□ -0.74
LINC00963-201ENST00000412141 PRPF18Q99633 342 aaKnown RBP10.44□□□□□ -0.74
LINC00963-201ENST00000412141 DUSP26Q9BV47 211 aa10.44□□□□□ -0.74
LINC00963-201ENST00000412141 PIGMQ9H3S5 423 aa10.44□□□□□ -0.74
LINC00963-201ENST00000412141 AKTIPQ9H8T0 292 aa10.44□□□□□ -0.74
LINC00963-201ENST00000412141 UBQLN4Q9NRR5 601 aa10.44□□□□□ -0.74
LINC00963-201ENST00000412141 ATAD3AQ9NVI7 634 aa10.44□□□□□ -0.74
LINC00963-201ENST00000412141 ST6GALNAC2Q9UJ37 374 aa10.44□□□□□ -0.74
LINC00963-201ENST00000412141 ROS1P08922 2347 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 IGLV3-32A0A0A0MS00 114 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 SH3D21A4FU49 640 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 GTPBP1O00178 669 aaKnown RBP10.43□□□□□ -0.74
LINC00963-201ENST00000412141 CASKO14936 926 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 OIP5O43482 229 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 TNFRSF21O75509 655 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 IL11P20809 199 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 PRPS1L1P21108 318 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 DNASE1P24855 282 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 KIR2DL2P43627 348 aaPredicted RBP10.43□□□□□ -0.74
LINC00963-201ENST00000412141 SLC6A8P48029 635 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 ZNF41P51814 821 aaPredicted RBP10.43□□□□□ -0.74
LINC00963-201ENST00000412141 RPS3AP61247 264 aaKnown RBP10.43□□□□□ -0.74
LINC00963-201ENST00000412141 HBA1P69905 142 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 SORDQ00796 357 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 DAZAP2Q15038 168 aaPredicted RBP10.43□□□□□ -0.74
LINC00963-201ENST00000412141 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.43□□□□□ -0.74
LINC00963-201ENST00000412141 GLYR1Q49A26 553 aaPredicted RBP10.43□□□□□ -0.74
LINC00963-201ENST00000412141 OR4F3Q6IEY1 312 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 ZCCHC12Q6PEW1 402 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 ZNF474Q6S9Z5 364 aaPredicted RBP10.43□□□□□ -0.74
LINC00963-201ENST00000412141 SPNS3Q6ZMD2 512 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 ANKRD46Q86W74 232 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 CLECL1Q8IZS7 167 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 MREGQ8N565 214 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 ZNF610Q8N9Z0 462 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 OR56A1Q8NGH5 318 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 OR5D16Q8NGK9 328 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 B4GALNT2Q8NHY0 566 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 COQ8BQ96D53 544 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 ARSGQ96EG1 525 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 ZC3HAV1LQ96H79 300 aaKnown RBP10.43□□□□□ -0.74
LINC00963-201ENST00000412141 ACTRT3Q9BYD9 372 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 C20orf27Q9GZN8 174 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 PIGUQ9H490 435 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 MED17Q9NVC6 651 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 KLHL28Q9NXS3 571 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 CARD8Q9Y2G2 431 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 AP4B1Q9Y6B7 739 aa10.43□□□□□ -0.74
LINC00963-201ENST00000412141 FAM221AA4D161 298 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 LINC01387J3KSC0 135 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 TNFSF11O14788 317 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 MSTNO14793 375 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 CXCL13O43927 109 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 DIAPH2O60879 1101 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 CYP7B1O75881 506 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 CPSF4O95639 269 aaKnown RBP10.42□□□□□ -0.74
LINC00963-201ENST00000412141 PLGP00747 810 aaPredicted RBP10.42□□□□□ -0.74
LINC00963-201ENST00000412141 MYZAPP0CAP1 466 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 CD1EP15812 388 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 SFTPDP35247 375 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 SLC1A6P48664 564 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 CCR4P51679 360 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 NME5P56597 212 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 ZNF117Q03924 483 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 EMX2Q04743 252 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 STX3Q13277 289 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 MLC1Q15049 377 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 TMEM44Q2T9K0 475 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 DCST2Q5T1A1 773 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 CBLN3Q6UW01 205 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 ZNF550Q7Z398 422 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 C6orf120Q7Z4R8 191 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 GGNQ86UU5 652 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 WDR75Q8IWA0 830 aaKnown RBP10.42□□□□□ -0.74
LINC00963-201ENST00000412141 RIMKLAQ8IXN7 391 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 TMCO5AQ8N6Q1 288 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 OR10D3Q8NH80 312 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 POC1BQ8TC44 478 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 MGARPQ8TDB4 240 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 WFIKKN1Q96NZ8 548 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 ZIM3Q96PE6 472 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 OR7D2Q96RA2 312 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 NUF2Q9BZD4 464 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 KLHL4Q9C0H6 718 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 DUSP22Q9NRW4 184 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 PNPOQ9NVS9 261 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 GPATCH2Q9NW75 528 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 NOP53Q9NZM5 478 aaKnown RBP10.42□□□□□ -0.74
LINC00963-201ENST00000412141 C6orf203Q9P0P8 240 aaPredicted RBP10.42□□□□□ -0.74
LINC00963-201ENST00000412141 STOML1Q9UBI4 398 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 NDRG3Q9UGV2 375 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 RAP2CQ9Y3L5 183 aa10.42□□□□□ -0.74
LINC00963-201ENST00000412141 FLNAP21333 2647 aaKnown RBP10.42□□□□□ -0.74
LINC00963-201ENST00000412141 A0A087WZY1 265 aa10.41□□□□□ -0.74
LINC00963-201ENST00000412141 A0A0J9YW62 118 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms