RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 PGFP49763 221 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 EFNB2P52799 333 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 SLC8A3P57103 927 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 DAOAP59103 153 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 IRF8Q02556 426 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 SRSF9Q13242 221 aaKnown RBP eCLIP3.89□□□□□ -1.79
BRCA1-204ENST00000412061 SLC17A1Q14916 467 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 UBE2V2Q15819 145 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 MRPL23Q16540 153 aaKnown RBP3.89□□□□□ -1.79
BRCA1-204ENST00000412061 ZNF74Q16587 644 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 KNOP1Q1ED39 458 aaKnown RBP3.89□□□□□ -1.79
BRCA1-204ENST00000412061 FAM83EQ2M2I3 478 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 RFTN2Q52LD8 501 aaPredicted RBP3.89□□□□□ -1.79
BRCA1-204ENST00000412061 OTUD3Q5T2D3 398 aaPredicted RBP3.89□□□□□ -1.79
BRCA1-204ENST00000412061 SLX4IPQ5VYV7 408 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 ZNF772Q68DY9 489 aaPredicted RBP3.89□□□□□ -1.79
BRCA1-204ENST00000412061 PDPK2PQ6A1A2 396 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 CAPRIN2Q6IMN6 1127 aaKnown RBP3.89□□□□□ -1.79
BRCA1-204ENST00000412061 RHBDD2Q6NTF9 364 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 ERICH5Q6P6B1 374 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 DEGS2Q6QHC5 323 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 C19orf35Q6ZS72 473 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 CCDC50Q8IVM0 306 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 GABRG1Q8N1C3 465 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 FBXL16Q8N461 479 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 GVQW1Q8N7I0 195 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 ICA1LQ8NDH6 482 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 DMBX1Q8NFW5 382 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 OR1L3Q8NH93 324 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 FBXO25Q8TCJ0 367 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 ASZ1Q8WWH4 475 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 TADA1Q96BN2 335 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 MSANTD3Q96H12 275 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 TIMD4Q96H15 378 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 FMO2Q99518 471 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 SLC30A2Q9BRI3 323 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 TUBGCP2Q9BSJ2 902 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 PAPOLGQ9BWT3 736 aaKnown RBP3.89□□□□□ -1.79
BRCA1-204ENST00000412061 ROGDIQ9GZN7 287 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 IKZF5Q9H5V7 419 aa3.89□□□□□ -1.79
BRCA1-204ENST00000412061 TEX10Q9NXF1 929 aaPredicted RBP3.89□□□□□ -1.79
BRCA1-204ENST00000412061 MRPL39Q9NYK5 338 aaKnown RBP3.89□□□□□ -1.79
BRCA1-204ENST00000412061 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.89□□□□□ -1.79
BRCA1-204ENST00000412061 FAF1Q9UNN5 650 aaPredicted RBP3.89□□□□□ -1.79
BRCA1-204ENST00000412061 EIF3LQ9Y262 564 aaKnown RBP3.89□□□□□ -1.79
BRCA1-204ENST00000412061 SCN5AQ14524 2016 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 SALL1Q9NSC2 1324 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 A0A0J9YYE9 177 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 ERICH2A1L162 156 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 TUBAL3A6NHL2 446 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 PDLIM1O00151 329 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 SLC1A7O00341 560 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 P2RY10O00398 339 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 CYB561D2O14569 222 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 KRT36O76013 467 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 OR2F2O95006 317 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 CLDN9O95484 217 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 YEATS4O95619 227 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 POP4O95707 220 aaKnown RBP3.88□□□□□ -1.79
BRCA1-204ENST00000412061 F10P00742 488 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 OAS1P00973 400 aaKnown RBP3.88□□□□□ -1.79
BRCA1-204ENST00000412061 TRBC1P01850 177 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 GAPDHP04406 335 aaKnown RBP3.88□□□□□ -1.79
BRCA1-204ENST00000412061 FRMD6-AS1P0C7T7 363 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 SLC2A2P11168 524 aaPredicted RBP3.88□□□□□ -1.79
BRCA1-204ENST00000412061 AOC1P19801 751 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 CCKARP32238 428 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 CRYBB2P43320 205 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 OR3A2P47893 321 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 DUSP3P51452 185 aaPredicted RBP3.88□□□□□ -1.79
BRCA1-204ENST00000412061 NOVA1P51513 510 aaKnown RBP3.88□□□□□ -1.79
BRCA1-204ENST00000412061 ABCE1P61221 599 aaKnown RBP3.88□□□□□ -1.79
BRCA1-204ENST00000412061 OTUD4Q01804 1114 aaKnown RBP3.88□□□□□ -1.79
BRCA1-204ENST00000412061 RIGQ13278 110 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 TP53I3Q53FA7 332 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 TEX44Q53QW1 395 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 CCDC122Q5T0U0 273 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 SLC8B1Q6J4K2 584 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 ACSM5Q6NUN0 579 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 HACD2Q6Y1H2 254 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 SCARA5Q6ZMJ2 495 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 LEKR1Q6ZMV7 388 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 UTS2BQ765I0 119 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 SCD5Q86SK9 330 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 NFE4Q86UQ8 179 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 PIGZQ86VD9 579 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 TPRA1Q86W33 373 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 KCNMB4Q86W47 210 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 TRIM69Q86WT6 500 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 VRK2Q86Y07 508 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 KBTBD3Q8NAB2 608 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 TRPV1Q8NER1 839 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 OR7G2Q8NG99 324 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 FAM110BQ8TC76 370 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 NRGNQ92686 78 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 RAB1CQ92928 201 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 BADQ92934 168 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 IL4I1Q96RQ9 567 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 TMEM121Q9BTD3 319 aa3.88□□□□□ -1.79
BRCA1-204ENST00000412061 ELOVL6Q9H5J4 265 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms