RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 MT-ND2P03891 347 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 RAB3AP20336 220 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 TACR3P29371 465 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 TAS2R38P59533 333 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 RPS18P62269 152 aaKnown RBP10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 TUBA3CQ13748 450 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 KHDC1Q4VXA5 237 aaKnown RBP10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 TMEM110Q86TL2 294 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 OR14K1Q8NGZ2 314 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 KIAA1191Q96A73 305 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 ASB9Q96DX5 294 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 CHRDQ9H2X0 955 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 TUBA8Q9NY65 449 aaPredicted RBP10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 CKMT2P17540 419 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 TIA1P31483 386 aaKnown RBP eCLIP10.61□□□□□ -0.717e-8■■■■■ 32.6
PRPF40A-202ENST00000410080 DIO3P55073 304 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 ZNF367Q7RTV3 350 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 GPRIN1Q7Z2K8 1008 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 SLC46A3Q7Z3Q1 461 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 RDH10Q8IZV5 341 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 MSANTD3Q96H12 275 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 FBXL20Q96IG2 436 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 HOXD1Q9GZZ0 328 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 GPATCH2Q9NW75 528 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 TMEM45AQ9NWC5 275 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 TEX10Q9NXF1 929 aaPredicted RBP10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 LIPT1Q9Y234 373 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 ABHD18Q0P651 414 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 OR2T4Q8NH00 348 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 PTGDR2Q9Y5Y4 395 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 A0A0J9YY10 115 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 DCDC2BA2VCK2 349 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 SRRM3A6NNA2 597 aaPredicted RBP10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 ZNF705FA8MVS1 300 aaPredicted RBP10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 K7ERQ8 282 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 PRICKLE3O43900 615 aaPredicted RBP10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 ZNF705DP0CH99 300 aaPredicted RBP10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 ZNF705BP0CI00 300 aaPredicted RBP10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 MAP2K4P45985 399 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 SERTAD2Q14140 314 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 SFXN5Q8TD22 340 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 MYOTQ9UBF9 498 aa10.61□□□□□ -0.71
PRPF40A-202ENST00000410080 A0A1W2PPV4 95 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 GPR32O75388 356 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 KCNE1P15382 129 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 CNN3Q15417 329 aaKnown RBP10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 PRAMEF20Q5VT98 475 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 ACBD4Q8NC06 268 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 C2CD4AQ8NCU7 369 aaPredicted RBP10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 BIRC7Q96CA5 298 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 TRMT2BQ96GJ1 504 aaKnown RBP10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 MFRPQ9BY79 579 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 SLC6A14Q9UN76 642 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 MYOFQ9NZM1 2061 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 MRPL33O75394 65 aaKnown RBP10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 RDH16O75452 317 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 SCAF4O95104 1147 aaKnown RBP10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 SLC35A2P78381 396 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 EMX2Q04743 252 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 MSS51Q4VC12 460 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 ZNF678Q5SXM1 525 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 OVCH1Q7RTY7 1134 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 TCEAL8Q8IYN2 117 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 CNIH3Q8TBE1 160 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 DPH2Q9BQC3 489 aaPredicted RBP10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 STEAP1Q9UHE8 339 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 EMC9Q9Y3B6 208 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 SERTM1A2A2V5 107 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 KDM4EB2RXH2 506 aaPredicted RBP10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 FAM72CH0Y354 149 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 IDH3GP51553 393 aaPredicted RBP10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 UGT3A2Q3SY77 523 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 FAM72AQ5TYM5 149 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 FAM72DQ6L9T8 149 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 ZNF783Q6ZMS7 281 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 FAM72BQ86X60 149 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 MAELQ96JY0 434 aaKnown RBP10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 B4DXG7 233 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 FAAHO00519 579 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 SLC22A2O15244 555 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 HTRA2O43464 458 aaPredicted RBP10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 SCO1O75880 301 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 F2P00734 622 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 TCN2P20062 427 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 DPP4P27487 766 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 EFNA3P52797 238 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 LRP10Q7Z4F1 713 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 NPIPA5A0A0B4J1W7 369 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 A0A1W2PPH5 198 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 NPIPA7E9PJI5 369 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 DVL2O14641 736 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 NPIPA8P0DM63 369 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 TNFRSF1BP20333 461 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 IL2RGP31785 369 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 ZXDBP98169 803 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 IGSF8Q969P0 613 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 APOOQ9BUR5 198 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 POTEKPQ9BYX7 375 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 NOSIPQ9Y314 301 aaKnown RBP10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 LRRC30A6NM36 301 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms