RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 FAM71CQ8NEG0 241 aa13.44□□□□□ -0.26
SUMO1-207ENST00000409498 TOR1AIP2Q8NFQ8 470 aa13.44□□□□□ -0.26
SUMO1-207ENST00000409498 NEIL3Q8TAT5 605 aa13.44□□□□□ -0.26
SUMO1-207ENST00000409498 ZG16BQ96DA0 208 aa13.44□□□□□ -0.26
SUMO1-207ENST00000409498 TMEM19Q96HH6 336 aa13.44□□□□□ -0.26
SUMO1-207ENST00000409498 LRRC37BQ96QE4 947 aa13.44□□□□□ -0.26
SUMO1-207ENST00000409498 GPATCH1Q9BRR8 931 aaKnown RBP13.44□□□□□ -0.26
SUMO1-207ENST00000409498 TSPAN10Q9H1Z9 355 aaPredicted RBP13.44□□□□□ -0.26
SUMO1-207ENST00000409498 DSN1Q9H410 356 aa13.44□□□□□ -0.26
SUMO1-207ENST00000409498 PTGES2Q9H7Z7 377 aa13.44□□□□□ -0.26
SUMO1-207ENST00000409498 EFCAB1Q9HAE3 211 aa13.44□□□□□ -0.26
SUMO1-207ENST00000409498 LIPGQ9Y5X9 500 aa13.44□□□□□ -0.26
SUMO1-207ENST00000409498 SVILO95425 2214 aa13.44□□□□□ -0.26
SUMO1-207ENST00000409498 ZNF407Q9C0G0 2248 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 TRGV5A0A0B4J1U4 118 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 CENPVL1A0A0U1RR11 272 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 A0A1B0GTH9 108 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 TMEM247A6NEH6 219 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 C17orf51A8MQB3 221 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 BCHEP06276 602 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 STSP08842 583 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 GNLYP22749 145 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 SLC6A2P23975 617 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 PGM1P36871 562 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 SUMO3P55854 103 aaPredicted RBP13.43□□□□□ -0.26
SUMO1-207ENST00000409498 RBPJQ06330 500 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 RBBP4Q09028 425 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 MRPL49Q13405 166 aaKnown RBP13.43□□□□□ -0.26
SUMO1-207ENST00000409498 ELOAQ14241 798 aaKnown RBP13.43□□□□□ -0.26
SUMO1-207ENST00000409498 PDZK1Q5T2W1 519 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 GCNT6Q5T4J0 391 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 OR5M10Q6IEU7 315 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 CALHM3Q86XJ0 350 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 SPPL2CQ8IUH8 684 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 CMIPQ8IY22 773 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 POU5F2Q8N7G0 328 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 CCDC197Q8NCU1 140 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 FAM83FQ8NEG4 500 aaPredicted RBP13.43□□□□□ -0.26
SUMO1-207ENST00000409498 OR4K17Q8NGC6 315 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 RCN3Q96D15 328 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 ARSGQ96EG1 525 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 C1GALT1C1Q96EU7 318 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 TREX2Q9BQ50 279 aaPredicted RBP13.43□□□□□ -0.26
SUMO1-207ENST00000409498 THUMPD3Q9BV44 507 aaKnown RBP13.43□□□□□ -0.26
SUMO1-207ENST00000409498 SPATA9Q9BWV2 254 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.43□□□□□ -0.26
SUMO1-207ENST00000409498 MED11Q9P086 117 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 PRDM4Q9UKN5 801 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 ICAM5Q9UMF0 924 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 SLC35A3Q9Y2D2 325 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 ESPL1Q14674 2120 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 DNAJC13O75165 2243 aa13.43□□□□□ -0.26
SUMO1-207ENST00000409498 A0A087WZY1 265 aa13.42□□□□□ -0.26
SUMO1-207ENST00000409498 ZNF264O43296 627 aa13.42□□□□□ -0.26
SUMO1-207ENST00000409498 PGM3O95394 542 aa13.42□□□□□ -0.26
SUMO1-207ENST00000409498 DBIP07108 87 aaKnown RBP13.42□□□□□ -0.26
SUMO1-207ENST00000409498 THBS1P07996 1170 aa13.42□□□□□ -0.26
SUMO1-207ENST00000409498 ETS2P15036 469 aa13.42□□□□□ -0.26
SUMO1-207ENST00000409498 DPP4P27487 766 aa13.42□□□□□ -0.26
SUMO1-207ENST00000409498 UQCRFS1P47985 274 aa13.42□□□□□ -0.26
SUMO1-207ENST00000409498 P2RX1P51575 399 aa13.42□□□□□ -0.26
SUMO1-207ENST00000409498 GFRA1P56159 465 aa13.42□□□□□ -0.26
SUMO1-207ENST00000409498 MTPNP58546 118 aa13.42□□□□□ -0.26
SUMO1-207ENST00000409498 KCNJ10P78508 379 aa13.42□□□□□ -0.26
SUMO1-207ENST00000409498 CDK6Q00534 326 aa13.42□□□□□ -0.26
SUMO1-207ENST00000409498 HSF1Q00613 529 aa13.42□□□□□ -0.26
SUMO1-207ENST00000409498 ZNF117Q03924 483 aa13.42□□□□□ -0.26
SUMO1-207ENST00000409498 CAPRIN1Q14444 709 aaKnown RBP13.42□□□□□ -0.26
SUMO1-207ENST00000409498 ZSWIM7Q19AV6 140 aa13.42□□□□□ -0.26
SUMO1-207ENST00000409498 TMEM44Q2T9K0 475 aa13.42□□□□□ -0.26
SUMO1-207ENST00000409498 PTOV1Q86YD1 416 aa13.42□□□□□ -0.26
SUMO1-207ENST00000409498 B4GALNT2Q8NHY0 566 aa13.42□□□□□ -0.26
SUMO1-207ENST00000409498 BBS10Q8TAM1 723 aa13.42□□□□□ -0.26
SUMO1-207ENST00000409498 PHOSPHO1Q8TCT1 267 aa13.42□□□□□ -0.26
SUMO1-207ENST00000409498 SARAFQ96BY9 339 aa13.42□□□□□ -0.26
SUMO1-207ENST00000409498 HOPXQ9BPY8 73 aaPredicted RBP13.42□□□□□ -0.26
SUMO1-207ENST00000409498 LAT2Q9GZY6 243 aa13.42□□□□□ -0.26
SUMO1-207ENST00000409498 EXOSC3Q9NQT5 275 aaKnown RBP13.42□□□□□ -0.26
SUMO1-207ENST00000409498 AP3M1Q9Y2T2 418 aa13.42□□□□□ -0.26
SUMO1-207ENST00000409498 L3MBTL1Q9Y468 752 aa13.42□□□□□ -0.26
SUMO1-207ENST00000409498 NBASA2RRP1 2371 aa13.42□□□□□ -0.26
SUMO1-207ENST00000409498 C15orf38-AP3S2A0A0A6YYH1 394 aa13.41□□□□□ -0.26
SUMO1-207ENST00000409498 C7orf72A4D263 438 aa13.41□□□□□ -0.26
SUMO1-207ENST00000409498 LINC01387J3KSC0 135 aa13.41□□□□□ -0.26
SUMO1-207ENST00000409498 ETV2O00321 342 aaPredicted RBP13.41□□□□□ -0.26
SUMO1-207ENST00000409498 BCKDKO14874 412 aa13.41□□□□□ -0.26
SUMO1-207ENST00000409498 CDC40O60508 579 aaKnown RBP eCLIP13.41□□□□□ -0.26
SUMO1-207ENST00000409498 SLC19A2O60779 497 aa13.41□□□□□ -0.26
SUMO1-207ENST00000409498 TRAPPC6AO75865 159 aa13.41□□□□□ -0.26
SUMO1-207ENST00000409498 PDE9AO76083 593 aa13.41□□□□□ -0.26
SUMO1-207ENST00000409498 ACTL6AO96019 429 aa13.41□□□□□ -0.26
SUMO1-207ENST00000409498 NID1P14543 1247 aa13.41□□□□□ -0.26
SUMO1-207ENST00000409498 CHMP24386 653 aa13.41□□□□□ -0.26
SUMO1-207ENST00000409498 PTGS2P35354 604 aa13.41□□□□□ -0.26
SUMO1-207ENST00000409498 DLX5P56178 289 aa13.41□□□□□ -0.26
SUMO1-207ENST00000409498 B3GALT5-AS1P59052 145 aa13.41□□□□□ -0.26
SUMO1-207ENST00000409498 PLAURQ03405 335 aa13.41□□□□□ -0.26
SUMO1-207ENST00000409498 CRYZQ08257 329 aaKnown RBP13.41□□□□□ -0.26
SUMO1-207ENST00000409498 SKP2Q13309 424 aa13.41□□□□□ -0.26
SUMO1-207ENST00000409498 KRT72Q14CN4 511 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms