RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 COL9A2Q14055 689 aaPredicted RBP5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 TBCEQ15813 527 aaPredicted RBP5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 SNAPC1Q16533 368 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 CT45A2Q5DJT8 189 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 CWF19L1Q69YN2 538 aaKnown RBP5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 ZNF550Q7Z398 422 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 KANSL1Q7Z3B3 1105 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 MRGPREQ86SM8 312 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 NKAIN4Q8IVV8 208 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 C1orf210Q8IVY1 113 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 TMEM151BQ8IW70 566 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 METTL27Q8N6F8 245 aaPredicted RBP5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 ZNF615Q8N8J6 731 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 B3GNT7Q8NFL0 401 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 C16orf52Q8NHV5 167 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 TEX47Q8TBZ9 253 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 PTPMT1Q8WUK0 201 aaPredicted RBP5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 NAT6Q93015 286 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 CCDC74AQ96AQ1 378 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 ZNF501Q96CX3 271 aaPredicted RBP5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 ZC3H10Q96K80 434 aaKnown RBP5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 SLC46A1Q96NT5 459 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 SLC38A2Q96QD8 506 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 IL4I1Q96RQ9 567 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 GPA33Q99795 319 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 CNPPD1Q9BV87 410 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 CDCA4Q9BXL8 241 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 LIN28AQ9H9Z2 209 aaKnown RBP5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 SLC25A19Q9HC21 320 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 MKKSQ9NPJ1 570 aaPredicted RBP5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 C11orf16Q9NQ32 467 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 NECTIN3Q9NQS3 549 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 PNO1Q9NRX1 252 aaKnown RBP5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 IL20Q9NYY1 176 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 TVP23BQ9NYZ1 205 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 TESQ9UGI8 421 aaKnown RBP5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 MRTO4Q9UKD2 239 aaKnown RBP5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 CBLCQ9ULV8 474 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 SLC7A7Q9UM01 511 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 SRPK3Q9UPE1 567 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 ERVK-19Q9WJR5 959 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 SPAG17Q6Q759 2223 aa5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 TDRD6O60522 2096 aaKnown RBP5.8□□□□□ -1.48
GTF3C3-202ENST00000409364 IGKV3D-11A0A0A0MRZ8 115 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 A0A1B0GX78 115 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 OR2W5A6NFC9 320 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 EFCAB7A8K855 629 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 NPIPB9F8W1W9 429 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 HRKO00198 91 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 POLR1CO15160 346 aaPredicted RBP5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 SLC22A1O15245 554 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 KLF4O43474 513 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 SIGLEC6O43699 453 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 TLX2O43763 284 aaPredicted RBP5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 ENTPD6O75354 484 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 FADS2O95864 444 aaKnown RBP5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 BCL10O95999 233 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 PDGFBP01127 241 aaPredicted RBP5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 THY1P04216 161 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 HMGN1P05114 100 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 IGFBP1P08833 259 aaPredicted RBP5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 ANKRD34CP0C6C1 535 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 PRG2P13727 222 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 FBLP22087 321 aaKnown RBP5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 PSMB9P28065 219 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 LCN1P31025 176 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 CSF2RBP32927 897 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 ADH7P40394 386 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 SLC15A1P46059 708 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 RFX3P48380 749 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 MASP1P48740 699 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 DUSP3P51452 185 aaPredicted RBP5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 NUDT6P53370 316 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 EFNB1P98172 346 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 NFATC3Q12968 1075 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 ELAVL1Q15717 326 aaKnown RBP5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 NSDHLQ15738 373 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 CLPPQ16740 277 aaPredicted RBP5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 TMEM44Q2T9K0 475 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 MINDY4Q4G0A6 757 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 KLHL22Q53GT1 634 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 PDZK1Q5T2W1 519 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 MFSD4BQ5TF39 518 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 RNLSQ5VYX0 342 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 PLAG1Q6DJT9 500 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 RHBDD2Q6NTF9 364 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 ACSM5Q6NUN0 579 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 CCDC81Q6ZN84 652 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 ARHGAP22Q7Z5H3 698 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 P2RY8Q86VZ1 359 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 GATAD2AQ86YP4 633 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 SLITRK4Q8IW52 837 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 NRMQ8IXM6 262 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 ZNF440Q8IYI8 595 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 CYP4Z2PQ8N1L4 340 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 CLDN22Q8N7P3 220 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 TCEANCQ8N8B7 351 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 LSMEM1Q8N8F7 131 aa5.79□□□□□ -1.48
GTF3C3-202ENST00000409364 PLPP5Q8NEB5 264 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms