RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 NKX2-2O95096 273 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 SYNGR4O95473 234 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 CNOT4O95628 575 aaKnown RBP8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 OPN1LWP04000 364 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 NGFRP08138 427 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 UROSP10746 265 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 PAX1P15863 534 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 GPC1P35052 558 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 PRKAG1P54619 331 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 RAC1P63000 192 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 KRTAP1-1Q07627 177 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 HSPB3Q12988 150 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 SLC29A2Q14542 456 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 KIAA0040Q15053 153 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 ZYG11AQ6WRX3 759 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 STAC2Q6ZMT1 411 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 BEND4Q6ZU67 534 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 FRMD7Q6ZUT3 714 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 CNPY4Q8N129 248 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 GTPBP8Q8N3Z3 284 aaPredicted RBP8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 CDRT4Q8N9R6 151 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 OR10D3Q8NH80 312 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 CEP70Q8NHQ1 597 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 FAM110BQ8TC76 370 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 MZB1Q8WU39 189 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 TMEM171Q8WVE6 324 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 SLC9A6Q92581 669 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 HOXB13Q92826 284 aaPredicted RBP8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 ZBTB8AQ96BR9 441 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 ADGRG7Q96K78 797 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 IQCGQ9H095 443 aaKnown RBP8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 TNFRSF12AQ9NP84 129 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 FANCFQ9NPI8 374 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 GLRX2Q9NS18 164 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 NTMQ9P121 344 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 PSMC3IPQ9P2W1 217 aaPredicted RBP8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 TBK1Q9UHD2 729 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 MCTS1Q9ULC4 181 aaKnown RBP8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 CCL27Q9Y4X3 112 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 PCNX3Q9H6A9 2034 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 TGP01266 2768 aa8.2□□□□□ -1.1
NIF3L1-203ENST00000409129 DYSFO75923 2080 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 A0A0J9YW62 118 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 A0A1W2PPM1 405 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 A0A1W2PRB8 838 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 C7orf72A4D263 438 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 NPIPB8E9PQR5 432 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 SLC28A1O00337 649 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 CXCL13O43927 109 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 TBX19O60806 448 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 TMCC2O75069 709 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 GLRA3O75311 464 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 OXSR1O95747 527 aaPredicted RBP8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 PLAUP00749 431 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 PROCP04070 461 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 PRPH2P23942 346 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 PSMA4P25789 261 aaKnown RBP8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 LCN1P31025 176 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 NR1H2P55055 460 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 MANFP55145 182 aaKnown RBP8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 DNAJB13P59910 316 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 SLC18A2Q05940 514 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 CTU2Q2VPK5 515 aaKnown RBP8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 CFAP157Q5JU67 520 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 PDSS1Q5T2R2 415 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 GTF2IRD2BQ6EKJ0 949 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 ANKRD26P1Q6NSI1 321 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 ZNF704Q6ZNC4 412 aaPredicted RBP8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 ESPNLQ6ZVH7 1005 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 GALNT10Q86SR1 603 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 GTF2IRD2Q86UP8 949 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 STK32CQ86UX6 486 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 IFT20Q8IY31 132 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 SLC16A11Q8NCK7 471 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 NUP43Q8NFH3 380 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 OR6Y1Q8NGX8 325 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 OR2V1Q8NHB1 315 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 ZFP28Q8NHY6 868 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 ACTRT2Q8TDY3 377 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 CIDECQ96AQ7 238 aaPredicted RBP8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 GIMAP5Q96F15 307 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 PLPPR2Q96GM1 343 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 ZNF764Q96H86 408 aaPredicted RBP8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 RNF145Q96MT1 663 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 NPAS1Q99742 590 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 OR10A4Q9H209 315 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 CXorf56Q9H5V9 222 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 REEP4Q9H6H4 257 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 LRTM1Q9HBL6 345 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 UBQLN4Q9NRR5 601 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 ZNF701Q9NV72 531 aaPredicted RBP8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 MED17Q9NVC6 651 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 C1orf109Q9NX04 203 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 GPR52Q9Y2T5 361 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 ROS1P08922 2347 aa8.19□□□□□ -1.1
NIF3L1-203ENST00000409129 TNFSF11O14788 317 aa8.18□□□□□ -1.1
NIF3L1-203ENST00000409129 HS3ST1O14792 307 aa8.18□□□□□ -1.1
NIF3L1-203ENST00000409129 KCNAB3O43448 404 aa8.18□□□□□ -1.1
NIF3L1-203ENST00000409129 RGS14O43566 566 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms