RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 C15orf38-AP3S2A0A0A6YYH1 394 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 NTN3O00634 580 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 ARHGEF9O43307 516 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 NUDT14O95848 222 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 FCGR3AP08637 254 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 HSD17B1P14061 328 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 RPA2P15927 270 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 ATP6V1C1P21283 382 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 GLRA2P23416 452 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 RFC2P35250 354 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 CHI3L1P36222 383 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 HTR5AP47898 357 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 NOVP48745 357 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 EMDP50402 254 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 ARFIP1P53367 373 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 IL17AQ16552 155 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 CDKN3Q16667 212 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 USH1GQ495M9 461 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 FAM182AQ5T1J6 154 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 KRTAP5-11Q6L8G4 156 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 ARMCX5Q6P1M9 558 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 ZNF562Q6V9R5 426 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 GDPGP1Q6ZNW5 385 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 NOTCH2NLQ7Z3S9 236 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 LHFPL4Q7Z7J7 247 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 RNF130Q86XS8 419 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 KLHDC8BQ8IXV7 354 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 BLIDQ8IZY5 108 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 N4BP2L2Q92802 583 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 LHX4Q969G2 390 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 AKR1E2Q96JD6 320 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 SENP8Q96LD8 212 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 GSDMAQ96QA5 445 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 SLC30A2Q9BRI3 323 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 FGFBP2Q9BYJ0 223 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 COA1Q9GZY4 146 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 TMEM117Q9H0C3 514 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 UPF3AQ9H1J1 476 aaKnown RBP3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 IL1RAPQ9NPH3 570 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 AGPAT5Q9NUQ2 364 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 DUS2Q9NX74 493 aaKnown RBP3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 TMEM181Q9P2C4 612 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 GAB2Q9UQC2 676 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 GAKO14976 1311 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 THSD7AQ9UPZ6 1657 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 PPIAL4CA0A0B4J2A2 164 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 TRGV8A0A0C4DH27 118 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 LRRC30A6NM36 301 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 IFITM10A6NMD0 228 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 PDLIM1O00151 329 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 PDHXO00330 501 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 ZNF749O43361 778 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 CYTH3O43739 400 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 SPAG6O75602 509 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 PALMO75781 387 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 PDE5AO76074 875 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 ZFAND5O76080 213 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 KIAA0754O94854 1291 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 TOXO94900 526 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 IGSF6O95976 241 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 IGHG1P01857 330 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 CHRNA1P02708 482 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 SNRPCP09234 159 aaKnown RBP3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 OR9G9P0C7N8 305 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 RNF224P0DH78 156 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 PPIAL4GP0DN37 164 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 TOP1P11387 765 aaKnown RBP3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 DRD5P21918 477 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 LONP1P36776 959 aaKnown RBP3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 ACTR1AP61163 376 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 GPM6BQ13491 265 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 ZKSCAN8Q15776 578 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 CYBRD1Q53TN4 286 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 TAF3Q5VWG9 929 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 RUSC1-AS1Q66K80 236 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 ASPHD2Q6ICH7 369 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 CES3Q6UWW8 571 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 TMEM184AQ6ZMB5 413 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 CEACAM19Q7Z692 300 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 VASH2Q86V25 355 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 VSTM4Q8IW00 320 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 OR52M1Q8NGK5 317 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 OR2T34Q8NGX1 318 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 OR52J3Q8NH60 311 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 BIRC7Q96CA5 298 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 TTC25Q96NG3 672 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 OPRPNQ99935 248 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 ATF6BQ99941 703 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 FAM173AQ9BQD7 235 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 FEM1AQ9BSK4 669 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 ALG12Q9BV10 488 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 SPZ1Q9BXG8 430 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 OCR1Q9BZK8 76 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 FAM114A2Q9NRY5 505 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 DCAF13Q9NV06 445 aaKnown RBP3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 MBD2Q9UBB5 411 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 OR10H1Q9Y4A9 318 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 MAB21L2Q9Y586 359 aa3.95□□□□□ -1.78
HMGB3P18-201ENST00000406327 COL5A3P25940 1745 aaPredicted RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms