RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 H3BNH8 94 aa26.75■■□□□ 1.87
USP42-202ENST00000404008 ACOT7O00154 380 aa26.75■■□□□ 1.87
USP42-202ENST00000404008 DBIP07108 87 aaKnown RBP26.75■■□□□ 1.87
USP42-202ENST00000404008 PPIAP62937 165 aaKnown RBP26.75■■□□□ 1.87
USP42-202ENST00000404008 FGFBP1Q14512 234 aa26.75■■□□□ 1.87
USP42-202ENST00000404008 ERICH5Q6P6B1 374 aa26.75■■□□□ 1.87
USP42-202ENST00000404008 RINLQ6ZS11 566 aa26.75■■□□□ 1.87
USP42-202ENST00000404008 PEX5LQ8IYB4 626 aa26.75■■□□□ 1.87
USP42-202ENST00000404008 TMEM251Q8N6I4 163 aa26.75■■□□□ 1.87
USP42-202ENST00000404008 OR2T12Q8NG77 320 aa26.75■■□□□ 1.87
USP42-202ENST00000404008 PHOSPHO1Q8TCT1 267 aa26.75■■□□□ 1.87
USP42-202ENST00000404008 BARD1Q99728 777 aaKnown RBP26.75■■□□□ 1.87
USP42-202ENST00000404008 HHATLQ9HCP6 504 aa26.75■■□□□ 1.87
USP42-202ENST00000404008 ETS2P15036 469 aa26.74■■□□□ 1.87
USP42-202ENST00000404008 ADH7P40394 386 aa26.74■■□□□ 1.87
USP42-202ENST00000404008 MLLT10P55197 1068 aa26.74■■□□□ 1.87
USP42-202ENST00000404008 PCBP3P57721 371 aaKnown RBP26.74■■□□□ 1.87
USP42-202ENST00000404008 EEFSECP57772 596 aaKnown RBP26.74■■□□□ 1.87
USP42-202ENST00000404008 ALDH6A1Q02252 535 aaKnown RBP26.74■■□□□ 1.87
USP42-202ENST00000404008 ZNF324BQ6AW86 544 aaPredicted RBP26.74■■□□□ 1.87
USP42-202ENST00000404008 DEFB107AQ8IZN7 70 aa26.74■■□□□ 1.87
USP42-202ENST00000404008 FADS6Q8N9I5 356 aa26.74■■□□□ 1.87
USP42-202ENST00000404008 UBQLN3Q9H347 655 aa26.74■■□□□ 1.87
USP42-202ENST00000404008 ALG2Q9H553 416 aa26.74■■□□□ 1.87
USP42-202ENST00000404008 ASF1BQ9NVP2 202 aa26.74■■□□□ 1.87
USP42-202ENST00000404008 ADA2Q9NZK5 511 aa26.74■■□□□ 1.87
USP42-202ENST00000404008 GMPR2Q9P2T1 348 aaKnown RBP26.74■■□□□ 1.87
USP42-202ENST00000404008 B4GALT7Q9UBV7 327 aa26.74■■□□□ 1.87
USP42-202ENST00000404008 PCNX3Q9H6A9 2034 aa26.73■■□□□ 1.87
USP42-202ENST00000404008 EIF4E1BA6NMX2 242 aaKnown RBP26.73■■□□□ 1.87
USP42-202ENST00000404008 B8ZZF3 427 aa26.73■■□□□ 1.87
USP42-202ENST00000404008 TFECO14948 347 aaPredicted RBP26.73■■□□□ 1.87
USP42-202ENST00000404008 ENDOUP21128 410 aaKnown RBP26.73■■□□□ 1.87
USP42-202ENST00000404008 AQP1P29972 269 aa26.73■■□□□ 1.87
USP42-202ENST00000404008 GSK3BP49841 420 aa26.73■■□□□ 1.87
USP42-202ENST00000404008 IFNEQ86WN2 208 aa26.73■■□□□ 1.87
USP42-202ENST00000404008 SIAH3Q8IW03 269 aa26.73■■□□□ 1.87
USP42-202ENST00000404008 OR2M3Q8NG83 312 aa26.73■■□□□ 1.87
USP42-202ENST00000404008 OR52P1PQ8NH57 321 aa26.73■■□□□ 1.87
USP42-202ENST00000404008 WDR60Q8WVS4 1066 aa26.73■■□□□ 1.87
USP42-202ENST00000404008 FAR1Q8WVX9 515 aa26.73■■□□□ 1.87
USP42-202ENST00000404008 FBXL2Q9UKC9 423 aa26.73■■□□□ 1.87
USP42-202ENST00000404008 GPC6Q9Y625 555 aaPredicted RBP26.73■■□□□ 1.87
USP42-202ENST00000404008 DNAJA2O60884 412 aa26.72■■□□□ 1.87
USP42-202ENST00000404008 CBR3O75828 277 aa26.72■■□□□ 1.87
USP42-202ENST00000404008 THBS1P07996 1170 aa26.72■■□□□ 1.87
USP42-202ENST00000404008 UBL4AP11441 157 aa26.72■■□□□ 1.87
USP42-202ENST00000404008 NID1P14543 1247 aa26.72■■□□□ 1.87
USP42-202ENST00000404008 IL7RP16871 459 aa26.72■■□□□ 1.87
USP42-202ENST00000404008 MAGEA5P43359 124 aa26.72■■□□□ 1.87
USP42-202ENST00000404008 VEZF1Q14119 521 aa26.72■■□□□ 1.87
USP42-202ENST00000404008 EIF3MQ7L2H7 374 aaKnown RBP26.72■■□□□ 1.87
USP42-202ENST00000404008 KRT73Q86Y46 540 aa26.72■■□□□ 1.87
USP42-202ENST00000404008 FAM109AQ8N4B1 249 aa26.72■■□□□ 1.87
USP42-202ENST00000404008 CPT1CQ8TCG5 803 aa26.72■■□□□ 1.87
USP42-202ENST00000404008 NR4A3Q92570 626 aa26.72■■□□□ 1.87
USP42-202ENST00000404008 C1orf21Q9H246 121 aa26.72■■□□□ 1.87
USP42-202ENST00000404008 ZDHHC11Q9H8X9 412 aa26.72■■□□□ 1.87
USP42-202ENST00000404008 AGPAT4Q9NRZ5 378 aa26.72■■□□□ 1.87
USP42-202ENST00000404008 ST6GALNAC1Q9NSC7 600 aaPredicted RBP26.72■■□□□ 1.87
USP42-202ENST00000404008 OLAHQ9NV23 265 aa26.72■■□□□ 1.87
USP42-202ENST00000404008 MED11Q9P086 117 aa26.72■■□□□ 1.87
USP42-202ENST00000404008 ELOVL7A1L3X0 281 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 CLDN24A6NM45 220 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 GCM2O75603 506 aaPredicted RBP26.71■■□□□ 1.87
USP42-202ENST00000404008 PABPC4LP0CB38 370 aaKnown RBP26.71■■□□□ 1.87
USP42-202ENST00000404008 MST1P26927 711 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 GDF1P27539 372 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 KCNJ10P78508 379 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 ZNF117Q03924 483 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 INTS11Q5TA45 600 aaKnown RBP26.71■■□□□ 1.87
USP42-202ENST00000404008 VRK2Q86Y07 508 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 MICU2Q8IYU8 434 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 OR4K17Q8NGC6 315 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 ZNF607Q96SK3 696 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 TSPAN10Q9H1Z9 355 aaPredicted RBP26.71■■□□□ 1.87
USP42-202ENST00000404008 DSN1Q9H410 356 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 QPCTLQ9NXS2 382 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 ZNF443Q9Y2A4 671 aaPredicted RBP26.71■■□□□ 1.87
USP42-202ENST00000404008 SLC35A3Q9Y2D2 325 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 CARD8Q9Y2G2 431 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 IFT52Q9Y366 437 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 GTPBP1O00178 669 aaKnown RBP26.71■■□□□ 1.87
USP42-202ENST00000404008 ZNF264O43296 627 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 OIP5O43482 229 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 CSTAP01040 98 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 MSX1P28360 303 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 PGM1P36871 562 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 PLAURQ03405 335 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 BNIP1Q12981 228 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 NDUFAF6Q330K2 333 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 LIN52Q52LA3 116 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 CMPK2Q5EBM0 449 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 CBLN3Q6UW01 205 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 BNC2Q6ZN30 1099 aaPredicted RBP26.71■■□□□ 1.87
USP42-202ENST00000404008 CMIPQ8IY22 773 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 FAM71CQ8NEG0 241 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 SH3YL1Q96HL8 342 aaPredicted RBP26.71■■□□□ 1.87
USP42-202ENST00000404008 CDRT15Q96T59 188 aa26.71■■□□□ 1.87
USP42-202ENST00000404008 CACYBPQ9HB71 228 aaKnown RBP26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms